Thanks Thomas!
Another question-
I have my protein.pdb with some inserted crystall waters within protein
interiour as well as water surrounded of my protein. I want to remove only
sorrounding water but prevent internal water ( wich could be functional
relevant ).
How I could to select such surrounded water ( e.g via some cutoff radius
relative my protein etc) wich I'd like to remove further ?
26 апреля 2012 г. 11:22 пользователь Thomas Holder <
spel...@users.sourceforge.net> написал:
> Hi James,
>
> use the alter command:
>
> alter chain "", chain="A"
>
> See also
> http://pymolwiki.org/index.**php/Alter<http://pymolwiki.org/index.php/Alter>
>
> Cheers,
> Thomas
>
> James Starlight wrote, On 04/26/12 09:18:
>
> Dear PyMol users!
>>
>>
>> I have some structure.pdb from the md simulation wich consist of 1 chain
>> not defined in the pdb file explicitly ( missing chain id in the pdb file).
>> So the pymol recognise that chain as the ' ' . I need to rename this
>> chain to the desired name ( e.g to chain A ).
>>
>> How I could do it?
>>
>> James
>>
>
> --
> Thomas Holder
> MPI for Developmental Biology
> Spemannstr. 35
> D-72076 Tübingen
>
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