[PyMOL] Fetching PDBs; how to load .cifs provided instead of .pdbs

Hi, I have noticed that for some PDBs wwPDB doesn't contain PDB files (e.g., 4V7Y ), but rather they have mmCIF files instead and I was wondering if it was possible to get the fetch command to fetch these mmCIFs instead of PDBs. Now

Re: [PyMOL] green rings

Incentive PyMOL 1.7.4.4 fixes this problem. Cheers, Thomas On 13 Mar 2015, at 23:55, Thomas Holder wrote: > The latest update to SVN fixes the ring color problem. > > Cheers, > Thomas > > H. Adam Steinberg wrote, On 03/10/15 10:39: >> Thank you! >> >>> On Mar 10, 2015, at 9:07 AM, Thomas

Re: [PyMOL] Removing chloride ions from CIF files

Hi Brenton, Have you specified that cl is element? remove element cl should work. At least it worked for me for a different cif structure from PDB Hope it helps Lukas -Original Message- From: Brenton Horne [mailto:brentonho...@ymail.com] Sent: Tuesday, March 17, 2015 8:49 PM To: pymo

Re: [PyMOL] apbs error (Error in background function)

Dear Thomas, thank you a lot for your quick reply. Just to help the users that might find these posts in the future; the path in my case was: /usr/local/lib/python2.7/dist-packages/pmg_tk/startup/apbs_tools.py and the plugin settings look like this: ... # Global config variables # # To change the