Matplotlib bundled with EduPyMOL-v1.7.4.4 is unfunctional under Linux.
Under Ubuntu 14.04 (trusty) amd64, launch EduPyMOL-v1.7.4.4-Linux-x86_64, and
type the following commands in the Command Input Area:
PyMOL>from matplotlib import pylab
PyMOL>pylab.plot([1,2],[3,4])
PyMOL>pylab.show()
The plo
Hello,
this is my first post on this mail list, as I just get acquainted with
the capabilities of open source pymol (version 1.6.x as mentioned in the
splash screen, installed directly from the repositories of Linux Xubuntu
14.04 LTS, yet synaptic package manager states version 1.7.0.0-1)
Hi Yeping,
You can also try
set cartoon_side_chain_helper, on
http://www.pymolwiki.org/index.php/Cartoon_side_chain_helper
Regards,
Folmer
2015-05-18 10:23 GMT+02:00 sunyeping :
>
> Dear all,
>
>
> I find that when I show the protein as cartoon representation in pymol,
> and select some residu
Hi Yeping Sun,
Try:
set cartoon_flat_sheets, 0
set cartoon_smooth_loops, 0
Cheers,
Tsjerk
On Mon, May 18, 2015 at 10:23 AM, sunyeping wrote:
>
> Dear all,
>
>
> I find that when I show the protein as cartoon representation in pymol,
> and select some residues to show as sticks, then the stic
Dear all,
I find that when I show the protein as cartoon representation in pymol, and
select some residues to show as sticks, then the sticks do not connect to the
backbone shown by the cartoon but looks as floating over the backbone. How to
make the sticks connect to the backbone?
With many tha
