Re: [PyMOL] Using cartoon putty-like command

2015-10-05 Thread David Hall
presumably: http://sourceforge.net/p/pymol/code/HEAD/tree/trunk/pymol/modules/pymol/preset.py#l164 On Mon, Oct 5, 2015 at 5:42 AM, Clavel wrote: > Hello everyone, > > I would like to create my own command within the pymol environement. > > I have currently a set of points in a pdb files with

Re: [PyMOL] Using cartoon putty-like command

2015-10-05 Thread João M . Damas
I am not really sure what you are trying to do, but understanding cartoon putty may be too much for what you are trying to achieve. But I think that changing all you atoms to "CA" and using: set cartoon_trace_atoms, 1 would do the trick. Cheers, João On Mon, Oct 5, 2015 at 10:42 AM, Clavel wro

[PyMOL] Using cartoon putty-like command

2015-10-05 Thread Clavel
Hello everyone, I would like to create my own command within the pymol environement. I have currently a set of points in a pdb files with b-factors that i would like to represent as the /cartoon putty/ command is doing.(ie pdb file) The main problem is that I don't precisely know what /cartoon