Re: [PyMOL] Farewell

2021-04-30 Thread Jason Key
Hi Everyone, I'd like to publicly thank Thomas for his contribution to PyMOL over the last decade. PyMOL is the primary tool the broader scientific community uses to access the results we create as structural biologists. For many researchers, PyMOL is their first window into macromolecular

Re: [PyMOL] Farewell

2021-04-30 Thread David Gae via PyMOL-users
Dear Thomas Holder, Thank you for helping out PyMOL users like myself. Also putting up user friendly advise for the over the years who use PyMOL. I tend to read your email correspondence with other users, since they seem to be more thought through than my few emails I asked in these forums.

Re: [PyMOL] Farewell

2021-04-30 Thread H. Adam Steinberg
Thank you Thomas for all the help you have provided us over the years! You have certainly made my experience with PyMOL far more useful and easier, with all of the answers and shortcuts you have provided to this list! Adam > On Apr 30, 2021, at 9:14 AM, Thomas Holder > wrote: > > Dear

[PyMOL] Farewell

2021-04-30 Thread Thomas Holder
Dear PyMOL community - The time has come for me to hand over my PyMOL development responsibilities at Schrödinger. It's been an incredible journey for me to get involved with the PyMOL community, to become a PyMOL fellow in 2011 and to start working full time for the project in 2012. I'm

Re: [PyMOL] Custom selection operators

2021-04-30 Thread Jarrett Johnson
Hi Ioannis, Might need more information regarding what you mean about 'complex property', but if you want a selection to include descriptors A, B, and C into a selection, something like ``` select your_sele, (A | B | C) ``` would suffice. or ``` select your_sele, A select your_sele, (your_sele

Re: [PyMOL] Running PyMOL on a headless machine

2021-04-30 Thread Thomas Holder
Hi Andras, Thanks for reporting this issue and for posting your solution/workaround. This issue will be fixed in PyMOL 2.5. Cheers, Thomas On Wed, Mar 24, 2021 at 10:25 AM András Ferenc WACHA wrote: > > Dear fellow PyMOL users, > > I have found a solution (at least a workaround): > > pymol

Re: [PyMOL] Problem with Pymol following update to Mac Big Sur

2021-04-30 Thread Thomas Holder
Hi Marc, The latest versions of PyMOL (e.g. 2.4) work fine on macOS Big Sur. Old versions of MacPyMOL (until 1.8.6) are not compatible, unfortunately, and we're not aware of any workarounds to make it work. Upgrading PyMOL is your only option. Cheers, Thomas On Mon, Apr 19, 2021 at 8:16 AM