[PyMOL] Yale morph server results. All scenes displayed.

2022-03-30 Thread Bruce Onisko
Hi! I just got output from the Yale morph server *http://morph2.molmovdb.org/submit.html * that allows construction of movies given structures of protein conformers. I opened the result in PyMol and see all the scenes displayed at the same time. Does anyon

Re: [PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs? (Bruce Onisko)

2019-09-04 Thread Bruce Onisko
> > > > You can reach the person managing the list at > > pymol-users-ow...@lists.sourceforge.net > > > > When replying, please edit your Subject line so it is more specific > > than "Re: Contents of PyMOL-users digest..." > > > > > &g

[PyMOL] amino acids displayed for mutagenesis. Hyp? PTMs?

2019-07-21 Thread Bruce Onisko
Hi all, I need to 'mutate" a residue of a protein to a hydroxyproline, aka HYP. In Wizard|Mutagenesis, I see how to choose 1 of about 20 other amino acids, but I hydroxyproline is not in the list. Does anyone know how I create such an entry? Or should I learn how to edit a proline? (Using Buil

[PyMOL] 3d monitor recommendation?

2019-02-12 Thread Bruce Onisko
Dear all, I used to use PyMol with a fast refreshing CRT and page flipping, but the monitor has died. What would you buy if you had $2,000 to replace it? Just a new monitor? Or any VR supported, maybe with an interface other than mice? Thanks! Bruce ___