Re: [PyMOL] Ray tracing with no GUI yields segmentation fault

Paulo - Brazil - Mensagem original - De: Thomas Holder thomas.hol...@schrodinger.com Para: Ricardo O. S. Soares rsoa...@fcfrp.usp.br Cc: pymol-users pymol-users@lists.sourceforge.net Enviadas: Terça-feira, 14 de Janeiro de 2014 18:18:37 Assunto: Re: [PyMOL] Ray tracing with no GUI

Re: [PyMOL] Ray tracing with no GUI yields segmentation fault

thomas.hol...@schrodinger.com Para: Ricardo O. S. Soares rsoa...@fcfrp.usp.br Cc: pymol-users pymol-users@lists.sourceforge.net Enviadas: Quarta-feira, 15 de Janeiro de 2014 17:32:00 Assunto: Re: [PyMOL] Ray tracing with no GUI yields segmentation fault Hi Ricardo, you didn't mention that you

[PyMOL] Ray tracing with no GUI yields segmentation fault

Hello everyone, I wrote a python script where pymol performs some color changes, ray tracing and image export. The script works perfectly if I enable the GUI, however if I load pymol without the GUI (-c flag) I receive a segmentation fault error. I found out that this issue is resolved by

Re: [PyMOL] How to install g_mdmat from Gromacs package into PyMOL

/Installation_Instructions/Windows Since, under these conditions, integration with pymol may pose some challenge (as Dr. Wassenaar wrote), I'd recommend that you use a linux system, or a virtual machine. Cheers, Ricardo.   ---  Ricardo O. S. Soares , PhD Student. Group of Biological Physics

Re: [PyMOL] custom textures

Hello Shiven, thanks for the Blender tip! Cheers!   ---  Ricardo O. S. Soares , PhD Student. Group of Biological Physics - Department of Physics Chemistry Faculty of Pharmaceutical Sciences at Ribeirão Preto - University of São Paulo. De: Shivender

[PyMOL] APBS Plugin: protein out of grid

Dear users, there's a particular case where I'm using the APBS plugin and the resultant grid leaves a portion of the protein out of it. This portion is show in full white because no potential is calculated there. Why isnt the grid centered as usual? Changing the values by hand and them