Hi Tanaya,
You can replace the default B-factor values in a PDB file with user defined
values.
Check out these links. They show how to use values from a user-defined file
and set a color gradient on your protein:
1. https://pymolwiki.org/index.php/Load_new_B-factors
2. https://pymolwiki.org/index
Hello everyone!
I am interested to know how to apply gradient colouring to the protein of my
interest based on user-defined values (not b factor or RMSD). What should be
the type and format of this user defined file, specifying the values? And what
is the command for implementing this?
It woul