Hi Jason,
On Sun, 29 Nov 2009 12:29:08 -0500, Jason Vertrees jason.vertr...@gmail.com
wrote:
You can automate the task. Load your 100 proteins. Use a wildcard
from the command line or a script like loadDir
(http://pymolwiki.org/index.php/LoadDir). Align them. Then, run:
python
for n
Robert,
Great point! My original script had selections from protein A to a
ligand in any other protein B. I just left it in there.
I agree that creating a named selection for each object is
unnecessary. If he really wanted a clean namespace, he could dump all
of those into a group(s) or a
Hello PyMol users,
I have a lot of pdb files open and I've superposed them to compare the
pockets. Now I would like to see the hydrogen bonds formed by each ligand to
the protein its been crystalised with. I would ideally like an object which
shows hydrogen bonds between the ligand(s) present (I
