Re: [PyMOL] Wait for processing to complete before invoking new commands

2020-04-29 Thread leifepeterson
to disk, without the time delay. Sleep mixed up ligands and image having the wrong ligand-specific filename. From: Tamas Hegedus Sent: Wednesday, April 29, 2020 10:40 PM To: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] Wait for processing to complete before invoking new

Re: [PyMOL] Wait for processing to complete before invoking new commands

2020-04-29 Thread Tamas Hegedus
Something is fishy... as I do not expect this to happen. I have never experienced this problem. I made different types of mistakes resulting in such a phenomenon. * using a for loop and in the command, loading the ligand, I did not inserted the loop variable into the file name (e.g. I used

[PyMOL] Wait for processing to complete before invoking new commands

2020-04-29 Thread leifepeterson
I am writing png images for many docked ligands but all the png files have the same image - even though the file names are different for the ligand_out.pdbqt files. So PyMol is getting ahead of itself and quickly looping through all the code and dumping the same image but with different files