> From: pymol-users-boun...@lists.sourceforge.net
> [mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf
> Of Sadler, Evan
> Sent: Thursday, February 21, 2008 10:14 AM
> To: pymol-users@lists.sourceforge.net
> Subject: [PyMOL] Align output
>
> I know in the past t
I know in the past this question was to be addressed in a future version.
Anyway, after aligning two structures, is there a way to dump out the
sequence alignment (i.e., as a msf file) or is the alignment display
onscreen the only way to see it?
Evan Sadler
--
J. Evan Sadler, M.D., Ph.D.
Howard
sourceforge.net
> [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of
> Andreas Förster
> Sent: Wednesday, September 29, 2004 8:23 AM
> To: pymol
> Subject: [PyMOL] align output
>
> Hey Warren, world,
>
> I want to make sure that I understand the output from t
Hey Warren, world,
I want to make sure that I understand the output from the align command
correctly. Here is an example:
align (protein1 and name ca), (protein2 and name ca)
Match: read scoring matrix.
Match: assigning 3194 x 3010 pairwise scores.
MatchAlign: aligning residues (3194 vs 3010
