Re: [PyMOL] attaching phosphate

2010-04-20 Thread Jason Vertrees
Alaena, The easiest way is to use PyMOL's built-in Molecular Builder. Click on the "Builder" Tab from the upper control window (or see http://pymolwiki.org/index.php/Builder). It should be pretty straightforward. You can also investigate the "replace" command, with "help replace". To use it, fi

[PyMOL] attaching phosphate

2010-04-20 Thread Alaena Alilin
Hi, is it possible to attach a phosphate to a residue? I used the following commands >create Phos, elem p >show spheres, phos but I don't know how to control which amino acid the phosphate is added to. I repeated the process two different times, and the amino acid was added to the same pho