Re: [PyMOL] color by element

2010-02-10 Thread Gerebtzoff, Gregori
, February 10, 2010 1:45 AM To: Ariel Talavera Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] color by element First of all, there is: color atomic which will do all the colors and for whatever reason does green for carbons Additionally, there's a general class of util.cba? whe

Re: [PyMOL] color by element

2010-02-09 Thread David Hall
First of all, there is: color atomic which will do all the colors and for whatever reason does green for carbons Additionally, there's a general class of util.cba? where question mark is replaced by one letter representing the color of carbon. I've been told by people that these are supposed to b

Re: [PyMOL] color by element

2010-02-09 Thread Michael Lerner
have you tried: import util util.cbag util.cbay util.rainbow etc? after you type "import util", you can type "util." followed by a to see the available commands. On Tue, Feb 9, 2010 at 6:09 PM, Nathaniel Echols wrote: > On Tue, Feb 9, 2010 at 2:46 PM, Ariel Talavera wrote: > >> How can I use

Re: [PyMOL] color by element

2010-02-09 Thread Nathaniel Echols
On Tue, Feb 9, 2010 at 2:46 PM, Ariel Talavera wrote: > How can I use the color by element (HNOS) function present in the GUI, > in a script? > I don't think there's a single command that does this; I've always done something like this: color grey80, elem c color white, elem h color red, elem o

[PyMOL] color by element

2010-02-09 Thread Ariel Talavera
Hi Pymolers, How can I use the color by element (HNOS) function present in the GUI, in a script? Thanks in advanced, Best, Ariel -- * Ariel Talavera Pérez, PhD Center of Molecular Immunology calle 216 esq. A 15, Atabey, Playa Havana 11600, CUBA