ment of the original molecule.
> Anyway, getting the translation / rotation matrix is much more convenient
> than copying all the coordinates... :-)
>
> Thanks once again!
>
> Matthias
>
>> Date: Tue, 19 Jan 2010 07:02:44 -0800
>> From: dwash59_2...@yahoo.com
>> Subje
hanks once again!
Matthias
> Date: Tue, 19 Jan 2010 07:02:44 -0800
> From: dwash59_2...@yahoo.com
> Subject: Re: [PyMOL] get translation / rotation matrix from "super"
> To: matze_haf...@hotmail.com; pymol-users@lists.sourceforge.net
>
> Matthias Haffke said:
&g
Matthias Haffke said:
> Is there a way to "extract" the translation / rotation matrix out of the
> super command or can I use another command to align both,
> protein B and A and to apply the function on every symmetry mate?
In addition the commands mentioned by Jason, you can look at matrix_co
Matthias,
fetch 1cll 1ggz, async=0
print cmd.get_object_matrix("1cll")
print cmd.get_object_matrix("1ggz")
super 1cll, 1ggz
print cmd.get_object_matrix("1cll")
print cmd.get_object_matrix("1ggz")
As you can see when an object is loaded it's transformation matrix is
the identity. Then, when yo
Hi everybody!
I was wondering if there is a way to get a translation / rotation matrix out of
the "super" command.
My problem is, that I want to superimpose 2 proteins (lets say protein B
superimposed on protein A), but I also want to use the same superposition (e.g.
the same translation and
