Re: [PyMOL] how to add acetyl group nto peptide by pymol

You can use the builder functionality to add a carbonyl and then a methyl to your lysine amine terminus. Unfortuantely you cannot optimize in Pymol. You could use Prodrug or CNS if you have some experience. Cheers Joel LIU Changdong wrote: Hi,evreyone: I've got a pdb file of short peptide

[PyMOL] how to add acetyl group nto peptide by pymol

Hi,evreyone: I've got a pdb file of short peptide (11aa),I want to add an acetyl group on Lys residue and optimize the structure.Is there anyone who can tell me how to do it? Best Dong