You can use Martz-Authored PDB Tools / MORPH2
Citation:
MORPH2 generates a series of interpolated frames between two PDB files. The PDB
files must match, atom by atom, in the same order. The interpolation is linear:
each atom "moves" in a straight line between its start and end positions. The
o
Hi Hasan,
Start with the structures superimposed and translate/rotate one/both
away from the/each other. Glue the images together in reversed order
and no one will see the difference...
By the way, it might be nice to start with small
translations/rotations and have them increase quadratically in
Use the "translate" command to move one/both of the pdb molecules until
they superimpose. Just interpolate the distance depending on how many
frames you want to do and the distance separated.
Cheers,
JTM
"We can be sure that if a detailed understanding of the molecular basis of
chemo-therapeutic
Hi,
I have two pdb files that I want to superimpose them onto each other. (I know
how to do this part)
however, at the same time i want to generate a movie showing those two pdb
files going into each other.
Does anyone know how to do it?
Thanks in advance.
Hasan Demirci
Department of Molecular
Hi List!
I'm trying to make some movie script. I read a bit about in several
places. By now I'm almost getting what I want, but I need help, follows
my partial script:
---
del all
load c1/forcedin.pdb,c1
load c2/forcedin.pdb,c2
frame 1
hide all
run Pymol/stride_ss
