Re: [PyMOL] remove cartesian coordinate from w/in transparent metal ions

2008-10-29 Thread Schubert, Carsten [PRDUS]
S. Leyh, Ph. D. [mailto:l...@aecom.yu.edu] Sent: Wednesday, October 29, 2008 2:39 PM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] remove cartesian coordinate from w/in transparent metal ions Every once in a while, I try to show a metal ion as a tranparent sphere and inevetiably get

Re: [PyMOL] remove cartesian coordinate from w/in transparent metal ions

2008-10-29 Thread Nathaniel Echols
On Wed, Oct 29, 2008 at 11:39 AM, Thomas S. Leyh, Ph. D. l...@aecom.yu.eduwrote: Every once in a while, I try to show a metal ion as a tranparent sphere and inevetiably get stuck trying to make the tiny cartesian coordinate system that appears at the center of the sphere disappear so it

Re: [PyMOL] remove cartesian coordinate from w/in transparent metal ions

2008-10-29 Thread gilleain torrance
Hmmm. I'm probably over-complicating matters, but: def before_load(): cmd.delete(all) def after_load(): cmd.as(cartoon) cmd.hide(nonbonded) def wrapped_load(filename): before_load() cmd.load(filename) after_load() cmd.extend(wrapped_load, wrapped_load) gilleain On