Re: [PyMOL] transparency for nb_spheres

2006-03-20 Thread Robert Immormino
Chad, You can try, show spheres, resn HOH (or whatever your waters are called) set sphere_scale, .2 set sphere_transparency, .5 Good luck, -bob On 3/20/06, Chad R. Simmons wrote: > Hello, > > I am using "nb_spheres" to represent waters in a figure I am generating but > cannot figure out how

[PyMOL] transparency for nb_spheres

2006-03-20 Thread Chad R. Simmons
Hello, I am using "nb_spheres" to represent waters in a figure I am generating but cannot figure out how to make them transparent (i.e. set sphere_transparency=x only works for traditional spheres). Any help would be greatly appreciated. Thanks. Chad ***