ists.sourceforge.net
[mailto:pymol-users-boun...@lists.sourceforge.net] On Behalf Of DeLano
Scientific
Sent: Thursday, September 06, 2007 11:24 AM
To: 'Mark A Saper'; 'Pymol'
Subject: Re: [PyMOL] PDB changed CONNECT records
Mark,
set connect_mode = 0 is the default, and this uses
Mark,
set connect_mode = 0 is the default, and this uses both distance-based and
explicit (CONECT-based) connectivity.
set connect_mode = 1 uses only explicity connectivity
we don't have a connect_mode = 2 yet (forcing use of distance-based
connectivity only), so instead, you'll need to remo
AFAIK setting connect_mode=1 strictly uses the CONECT records from pdb file
to draw bonds.
Cheers,
Abhi.
On 9/6/07, Mark A Saper wrote:
>
> This was previously discussed in an archived email but I can't find it
> right now. Does the setting connect_mode=0 use the CONECT records in the
> PDB f
