Dear PyMol users,
I'm currently trying to display individual surfaces around different
selections of a molecule to show how they contact each other. However, either
I get only the last surface displayed or a joined surface using the command
examples below:
this one gives only the surface of
Dirk,
The trick for displaying contact surfaces in PyMOL is to
create separate objects for each surface:
create res431, resi 431
create res440, resi 440
show surface, res431 or res440
For CPK, you don't need to do this
show spheres, resi 431+440
Cheers,
Warren
--
Uwe,
We plan a research project where we want to stepwise incorporate
D-amino
acids into a peptide. To determine the exchanges it would be very
useful
if
PyMol could assist.
If I might dream I would like to have D-amino acids (and maybe other
un-
usual amino acids) available in the
Thanks for this Warren, but now I get a fresh set of error messages (still
no menus) with no obvious explanation along the lines of missing package
xxx.
Exception in thread Thread-1:
Traceback (most recent call last):
File /usr/lib/python2.2/threading.py, line 408, in __bootstrap
self.run()
Hi List!
I'm glad to see others enjoying MDK 9.1.
But pymol rpm for RH is a friend of MDK, I suggest you use
pymol-0_90-bin-linux-libc6-i386.tgz
It works terrifically for me.
Dear Warren, realy great job!
If possible, a proper pymol rpm for MDK 9.1 would be very welcome, since I
believe
