I just loaded a CCP4-format density map and am having a little
trouble getting the map to cover the area of interest on the model.
The displayed map covers the entire unit cell, but the model I am
working with is located at the bottom corner with many of the atoms
spilling over into neighbo
Hi Richard,
Unfortunately, PyMOL will not do symmetry expansion. You could use ccp4s
mapmask to extend an existing map around a molecule. An example script
is below (BORDER is the number of angstroms around the input model to
calculate the new map)
mapmask \
XYZIN model.pdb \
MAPIN previous_m