Re: [PyMOL] Problems importing pymol functionality under a pythonscript.

2007-10-05 Thread David McGiven
Dear Sir, Thanks for your prompt reply. However, that didn't help either. [r...@machine root]# python Python 2.3.5 (#2, Oct 16 2006, 19:19:48) [GCC 3.3.5 (Debian 1:3.3.5-13)] on linux2 Type "help", "copyright", "credits" or "license" for more information. >>> import sys >>> sys.path.append('/opt

[PyMOL] Using a .png/.tif file as a cgo_plane type object.

2007-10-05 Thread David Briggs
Hi everyone. Is there a way in pymol to use a .png or a .tif as a cgo_plane type object, to place behind a structure (and optionally cast shadows across)? Cheers, David -- David C. Briggs PhD Father & Crystallographer http://personalpages.manchester.ac.uk/staff/Da

[PyMOL] VRML color

2007-10-05 Thread Greg Williams
All, If you apply different colors to the helices and a sheets of a protein, choosing Save Image As VRML gives a .wrl file that I can open in Cinema 4D. However, all of the color is lost, and a single gray material is added to entire protein. Is this color loss specific to C4D or is it a limitati

Re: [PyMOL] VRML color

2007-10-05 Thread DeLano Scientific
Hi Greg, As a fellow C4D licensee, this is an issue I complained to support about quite some time ago. Their response was that C4D simply does not support color-interpolated triangles (which comprise virtually all molecular models!). As far as I know, this hasn't been solved since... What I can