Re: [PyMOL] Fetching PDBs; how to load .cifs provided instead of .pdbs

2015-03-19 Thread Lukáš Pravda
Hi Brenton, fetch 4v7y, type=cif is the command you are looking for All the best Lukas Pravda --- CEITEC - Central European Institute of Technology Masaryk University Brno, Czech Republic --- From: Brenton Horne [mailto:brentonho...@ymail.com] Sent: Thursday, March 19, 20

[PyMOL] AxPymol with wine?

2015-03-19 Thread Paul Paukstelis
Has anyone successfully installed AxPymol under wine? I thought I would give this a try as a way to avoid having to fire up a VM on older hardware. --paul -- Dive into the World of Parallel Programming The Go Parallel We

[PyMOL] Compile Errors on SVN 4111

2015-03-19 Thread Matthew Baumgartner
Hi, I'm getting compile errors on the latest SVN build (4111). Any help would be appreciated. Thanks, Matt Baumgartner $ sudo python setup.py build -j 1 fatal: Not a git repository (or any parent up to mount point /home) Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). r

Re: [PyMOL] Compile Errors on SVN 4111

2015-03-19 Thread Tim Travers
Hi, I also had problems compiling this last night. According to the following (see "Compile and install" towards the bottom), you have to call first: export CPPFLAGS="-std=c++0x" before doing the build call. I used: export CPPFLAGS="-std=c++11x" so depends on your compiler. HTH, Tim On Thu, M

Re: [PyMOL] Compile Errors on SVN 4111

2015-03-19 Thread Justin Lecher
On 19/03/15 16:52, Tim Travers wrote: > > Hi, > > I also had problems compiling this last night. According to the > following (see "Compile and install" towards the bottom), > you have to callfirst: > export CPPFLAGS="-std=c++0x" > before doing the build call. > > I used: > export CPPFLAGS="-std

Re: [PyMOL] Compile Errors on SVN 4111

2015-03-19 Thread Thomas Holder
Hi Justin, unfortunately, not everyone is on Gentoo... see comment about distutils and CXXFLAGS here: https://sourceforge.net/p/pymol/bugs/159/#58a5 Cheers, Thomas On 19 Mar 2015, at 15:39, Justin Lecher wrote: > On 19/03/15 16:52, Tim Travers wrote: >> >> Hi, >> >> I also had problems com

Re: [PyMOL] Compile Errors on SVN 4111

2015-03-19 Thread Justin Lecher
On 19/03/15 20:45, Thomas Holder wrote: > Hi Justin, > > unfortunately, not everyone is on Gentoo... see comment about distutils and > CXXFLAGS here: > https://sourceforge.net/p/pymol/bugs/159/#58a5 Hi Thomas, absolutely right, scipy is also suffering from this. There is an open bug at distutil