Hi andrea,
you can easily do this by
split_states my_struct
dele my_struct
for the NMR ensemble, then I would use the action menu, align function
and align them to state_1. This is in effect aligning the separate
states as objects, unless I misunderstood you
J
Andrea Spitaleri wrote:
Hi
Hi all,
in pymol is it possible to align states rather than object. I mean, I
have loaded a pdb file with n-structures and I'd like to align each of
them on the first one of the bundle.
Thanks in advance
Regards
andrea
--
Why stand on a silent platform?
Fight the war, fuck the norm
(RATM)
Hi Mikael,
As far as I'm aware that is not possible (and definitely not with
"run", see 'help run'). What you can do is to define a function in
test.py, which takes the arguments you want. Then, after running the
script you can use the function as you please. If, in addition, you
add to the end o
Hi all,
is there a way to run Python scripts with options in PyMOL, e.g.
run test.py -i [PDB file name]
? When I naïvely run the above I get
no file 'test.py -i [PDB file name]' found.
Thanks,
Mikael Sonne Hansen
