[PyMOL] Distance measurement between atom groups

2012-01-24 Thread James Starlight
Dear PyMol Users! In the PyMol Wizard I've found very userful option called distance measurements beyween selected atoms. I wounder to know how I could realize such operation via PyMol console in the simplest manner. My current task consist of making different point mutations and subsiquent

Re: [PyMOL] Distance measurement between atom groups

2012-01-24 Thread Thomas Holder
Hi James, use the distance command: http://pymolwiki.org/index.php/Distance For the potential h-bonds, use it with mode=2. Cheers, Thomas On 01/24/2012 05:15 PM, James Starlight wrote: Dear PyMol Users! In the PyMol Wizard I've found very userful option called distance measurements

Re: [PyMOL] Distance measurement between atom groups

2012-01-24 Thread James Starlight
Thanks Thomas! I've already tried use this command. I want just ask about Hbond representation between 2 selected regions. E.g I want to represent Hbonds beetween 2 helices Firstly I've added donor Hydrogens H_add donors and than distance 3sn6 and resi 197-220, 3sn6 and resi 275-298,