[PyMOL] 2nd Call For Papers, 21th Annual Tcl/Tk Conference 2014

2014-08-12 Thread Andreas Kupries
21'th Annual Tcl/Tk Conference (Tcl'2014) http://www.tcl.tk/community/tcl2014/ [ It is 4 weeks to the deadline for Abstracts and proposals ... ] November 10 - 14, 2014 Embassy Suites Downtown Portland, Oregon, USA Important Dates: Abstracts and proposals due Sep 8, 2014 Notification to

Re: [PyMOL] RMSD for selected residues

2014-08-12 Thread Sampson, Jared
Hi Nidhi - The “Align” feature in the GUI uses PyMOL's `align` command, which performs a sequence alignment to use as the basis for structural alignment. It only uses those residues which match exactly, which can throw off the RMSD. Try using `super` or `cealign` instead, which are