I am using pymol to display the surface of inorganic crystals, and
have used it successfully in the past for relatively small molecules.
I am not trying to display larger surfaces (>1e6 atoms), and now
notice a discrepancy between the number of atoms present in and loaded
from the source file, and
7;ve
> easily loaded millions of atoms before and got the correct atom count.
>
> Cheers,
>
> -- Jason
>
> On Wed, Apr 18, 2012 at 8:54 PM, Rolf S. Arvidson wrote:
> > I am using pymol to display the surface of inorganic crystals, and
> > have used it successfully
lt as Linux session. Thanks again for any help you can
provide.
Cheers //Rolf
On Thu, Apr 19, 2012 at 07:58:56AM -0500, Rolf S. Arvidson wrote:
> Hi Jason,
>
> Thanks for the speedy reply. I've posted the ASCII .xyz data file,
> compressed equivalent, and screen caps at
>
= ncopy(cc, p, 9);
> if(sscanf(cc, "%d", &nAtom) != 1) {
> nAtom = 0;
> tinker_xyz = false;
>
> Cheers,
> Thomas
>
> On 04/19/2012 04:00 PM, Rolf S. Arvidson wrote:
>> Hi Jason,
>>
>> I've also posted a screen cap of VMD with
again-
Cheers //Rolf
On Thu, Apr 19, 2012 at 12:11:56PM -0500, Rolf S. Arvidson wrote:
> Hi Thomas,
> Thanks very much for this patch, I will apply and post back results. Cheers!
> // Rolf
>
> On Thu, Apr 19, 2012 at 11:46 AM, Thomas Holder
> wrote:
> > Hi Rolf,
> &
Hi
This is not a pymol problem per se, but I'm trying to figure out
whether the error below is hardware-related (video card) or
software-related (i.e., video driver/mesa/opengl libraries, etc.). If
I run pymol from the command line (loading one of the demo files,
pept.r3d), the pymol graphics and i
