Re: [PyMOL] Viewing trajectories in pymol

2018-11-21 Thread Floris van Eerden
movie panel. # Set a movie slider set movie_panel=1 #movie.add_state_sweep(1,0,start=1) movie.add_state_loop(1,0,start=1) Best, Istvan On Tue, Nov 20, 2018 at 5:02 AM Floris van Eerden mailto:florisvaneer...@biken.osaka-u.ac.jp>> wrote: Dear Pymol community, Is there a way to easil

[PyMOL] Viewing trajectories in pymol

2018-11-20 Thread Floris van Eerden
with the mset command. However this does not provide as a smooth experience. Best wishes, Floris van Eerden ___ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net

Re: [PyMOL] raytracing a transparant surface, with reflections only on the cofactors inside

2015-01-15 Thread Floris van Eerden
on objects or selections will have no effect. This is not a bug, bug of course can be considered a missing feature. We will check how difficult this would be to implement on the object or atom level. Cheers, Thomas On 14 Jan 2015, at 12:07, Floris van Eerden mailto:f.j.van.ee

Re: [PyMOL] raytracing a transparant surface, with reflections only on the cofactors inside

2015-01-14 Thread Floris van Eerden
Hello Jared and Tsjerk, I tried your suggestion, but unfortunately it does not work on my computer. When I type the command set spec_reflect, 0, all Pymol gives the following output: -->Setting: spec_reflect set to 0.0 in 8 objects. So it seems okay. But however when I raytrace, I still get a

Re: [PyMOL] raytracing a transparant surface, with reflections only on the cofactors inside

2015-01-12 Thread Floris van Eerden
ese are object/selection or global properties. But have you tried specifying the selection? set spec_reflect, 0, protein Haven't tried it myself, though. Cheers, Tsjerk On Jan 9, 2015 4:07 PM, "Floris van Eerden" <mailto:f.j.van.eer...@rug.nl>> wrote: Dear all

[PyMOL] raytracing a transparant surface, with reflections only on the cofactors inside

2015-01-09 Thread Floris van Eerden
Dear all, My question is if I can set for different molecules in my system, how much they reflect light during ray-tracing My current system is a protein which contains some cofactors. The cofactors are coloured according to their B value and the protein is shown as a transparant grey surface.