Re: [PyMOL] Alpha setting of CGO spheres

2015-01-21 Thread Matthew Baumgartner
Great, thanks! Matt On 01/20/2015 08:01 PM, Osvaldo Martin wrote: Hi Matt, Try removing the BEGIN sph1 = [ALPHA, 0.5, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181, -15.016, 0.5] cmd.load_cgo(sph1, sph1, 1) sph2 = [ALPHA, 1.0, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181, -15.016, 0.5]

[PyMOL] Alpha setting of CGO spheres

2015-01-20 Thread Matthew Baumgartner
Hi, I'm having some trouble using CGO spheres. When I create one, it is not visible in the viewer, although there is an (apparently empty) object in the object pane. It is somewhat confusing because with some parameters the spheres ARE visible when ray tracing, although they are still not

Re: [PyMOL] Alpha setting of CGO spheres

2015-01-20 Thread Osvaldo Martin
Hi Matt, Try removing the BEGIN sph1 = [ALPHA, 0.5, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181, -15.016, 0.5] cmd.load_cgo(sph1, sph1, 1) sph2 = [ALPHA, 1.0, COLOR, 1.0, 1.0, 1.0, SPHERE, -3.818, -28.181, -15.016, 0.5] cmd.load_cgo(sph2, sph2, 1) Cheers, Osvaldo. On Tue, Jan 20, 2015 at