Dear Warren,
using PyMOL without any additional plug-ins, like slerpy or eMovie,
is it possible to fade in or out a surface of, say, a ligand, between
scenes?
Best regards,
Dirk.
***
Dirk Kostrewa
Gene Center, A 5.07
01, 2009 8:57 AM
To: PyMOLBB
Subject: [PyMOL] Smooth fading of surface in movie?
Dear Warren,
using PyMOL without any additional plug-ins, like slerpy or
eMovie, is it possible to fade in or out a surface of, say, a
ligand, between scenes?
Best regards,
Dirk
[mailto:kostr...@genzentrum.lmu.de]
Sent: Tuesday, September 01, 2009 9:56 AM
To: PyMOLBB
Subject: Re: [PyMOL] Smooth fading of surface in movie?
Dear Carsten,
yes, thanks. However, for a smooth fading, that would require a lot
of scenes. Is there a simple python loop, that would create scenes
Dirk,
you could try playing around with different transparency settings in
subsequent scenes to emulate the effect.
HTH
Carsten
From: Dirk Kostrewa [mailto:kostr...@genzentrum.lmu.de]
Sent: Tuesday, September 01, 2009 8:57 AM
To: PyMOLBB
Subject: [PyMOL] Smooth fading of surface
I use a clunky set of mdo commands to do this.
mdo 266: set transparency, .1, (palm+linker+Nterm)
mdo 267: set transparency, .2, (palm+linker+Nterm)
mdo 268: set transparency, .3, (palm+linker+Nterm)
mdo 269: set transparency, .4, (palm+linker+Nterm)
mdo 270: set transparency, .5,
Hi :)
Some people are just not lazy enough ;) Lazy people like me spend a
good deal of effort thinking about how to avoid efforts like writing
repetitive lines :p And then you could come up with:
from math import sin,pi
mset 1 x300
for i in range(200,301): cmd.mdo( i, set
