ructing the backbone atoms.
Yes, we can color each SSE accordingly but I was hoping that there was a better
solution.
Best,
Sean
> From: darre...@niaid.nih.gov
> To: magic...@hotmail.com; jared.samp...@nyumc.org
> CC: pymol-users@lists.sourceforge.net
> Subject: Re: [PyMOL] Visualize S
Sean Law mailto:magic...@hotmail.com>>
Date: Wednesday, June 4, 2014 4:17 PM
To: "Sampson, Jared" mailto:jared.samp...@nyumc.org>>
Cc:
"pymol-users@lists.sourceforge.net<mailto:pymol-users@lists.sourceforge.net>"
mailto:pymol-users@lists.sourceforge.net>>
.samp...@nyumc.org>
To: magic...@hotmail.com<mailto:magic...@hotmail.com>
CC: pymol-users@lists.sourceforge.net<mailto:pymol-users@lists.sourceforge.net>
Subject: Re: [PyMOL] Visualize Sheets from C-alpha Only Structure
Date: Wed, 4 Jun 2014 20:03:54 +
Hi Sean -
I can confirm this beha
by
> not being able to define the flat plane though.
>
> Best,
>
> Sean
>
> --
> From: jared.samp...@nyumc.org
> To: magic...@hotmail.com
> CC: pymol-users@lists.sourceforge.net
> Subject: Re: [PyMOL] Visualize Sheets from C-alpha Only Structu
oth helices and sheets after
altering the residue's SS assignment by hand? I see what you mean by not being
able to define the flat plane though.
Best,
Sean
From: jared.samp...@nyumc.org
To: magic...@hotmail.com
CC: pymol-users@lists.sourceforge.net
Subject: Re: [PyMOL] Visualize Sheets from C-
Hi Sean -
I can confirm this behavior, but I’m not sure it’s unintentional on PyMOL’s
part. Rather, I think it may have something to do with two facts: 1) unlike
loops, sheets represented in automatic mode are not radially symmetric; and 2)
unlike helices, the orientation of the sheet at a par
Hi PyMOLers,
I have a c-alpha only model and I would like to visualize both helices and
sheets based on my own custom SS assignments (via "alter"). Altering a
residue's SS assignment to helix or loop (ss="H" or ss="L") is fine and can be
visualized. However, altering a residue's SS assignment to
