Thank you so much Kamil and Blaine for the insights, that worked very well!
On Wed, 7 Jul 2021 at 05:04, Mooers, Blaine H.M. (HSC) <
blaine-moo...@ouhsc.edu> wrote:
> Hi Neena,
>
> Adding to Kamil's explanation, the role of each column for a ATOM record
> in the PDB file is explained here:
>
Hello PyMOL users,
I have a question regarding structure exporting from PyMOL. I have a
peptide that adopts two conformations in gas phase: compact globule and
helical ( see below). I was wondering how to best export these structures
from two different PDB files with the same scale.
[image:
You got error in column positioning in PDB file - I added two whitespaces
after ATOM mark. It probably couldn't parse the PDB file properly as the
PDB file is column-specific format. It works now.
Chk attached file in PyMOL.
Kamil
wt., 6 lip 2021 o 23:13 Neena Susan Eappen
napisał(a):
> Hello
Hi Neena,
Adding to Kamil's explanation, the role of each column for a ATOM record in the
PDB file is explained here:
https://www.wwpdb.org/documentation/file-format-content/format33/sect9.html#ATOM.
The PDBeditor.jar program can help you retain the fixed file format of the PDB
file:
