Hi Martin,
have a look at:
http://pymolwiki.org/index.php/Supercell
Run something like this:
supercell 2,2,2, withmates=1
Your structure file needs a CRYST1 record that holds the box dimensions.
Cheers,
Thomas
On 06/14/2011 11:55 AM, Martin Hediger wrote:
Dear List
I am trying to prepare a figure. I have a protein structure, enclosed by
a rectangular box. Is it possible to copy/translate the enboxed
structure for a given amount of times? This would end up as something as
an illustration of a system with periodic boundaries.
I attached a figure on my blog http://qmviews.blogspot.com/. If I cant
come up with a PyMOL solution, then I guess I'll just try to find a
Python solution.
Thanks for any hints on this.
--
Thomas Holder
MPI for Developmental Biology
--
EditLive Enterprise is the world's most technically advanced content
authoring tool. Experience the power of Track Changes, Inline Image
Editing and ensure content is compliant with Accessibility Checking.
http://p.sf.net/sfu/ephox-dev2dev
___
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
