Re: [PyMOL] On APBS, Isomesh generation and export

2018-02-08 Thread Thomas Holder
Hi Fernando, Can't find any bad english in your email :-) 1: https://en.wikipedia.org/wiki/Marching_cubes 2: To open the isomesh again in PyMOL, I suggest to save a PyMOL session file (.pse). Getting access to the actual geometry is more tricky. There is a script on the PyMOLWiki which can con

[PyMOL] On APBS, Isomesh generation and export

2018-02-04 Thread Fernando Oliveira
Hi! This is my first e-mail to this list. Sorry in advance for my bad english. I've been using APBS for the past month in order to build protein binding sites representations for a artificial neural network I've been working on. At first I used the OpenDX output file from APBS stand-alone but I w