Re: [PyMOL] Function signature
Hi Robert
Thanks, in principle yes it's doing it now the way i was hoping. As I
wrote, the point was to be able to enter the command at the pymol prompt
like:
zoom_custom resi 117
and not
zoom_custom(117)
--> So to avoid the parenthesis (user friendliness and stuff...)
Thanks again
Martin
On 18.04.16 03:17, Robert Campbell wrote:
Hi Martin,
If you simply want to be able to have the function operate on any
selection, simply do this:
def zoom_custom(position):
cmd.zoom(position)
cmd.extend("zoom_custom", zoom_custom)
This allows you to type:
zoom_custom resi 117
or any other more complicated selection syntax without any parentheses.
Perhaps I am missing something in your specific requirements?
Cheers,
Rob
On Sun, 2016-04-17 20:18 +0200, Martin
Hediger wrote:
Dear all
In PyMOL, the syntax for eg. zooming in on residue 110 of a protein
would be
zoom resi 117
I have a pymol script where I define a function that also zooms in on
a residue (it's simple, only to illustrate the point):
def zoom_custom(position):
cmd.zoom("resi" + " " + str(position))
cmd.extend("zoom_custom", zoom_custom)
However, when I want to call it from the PyMOL promt, i have to use
zoom_custom(117)
i.e. using parenthesis. How do i need to design the function such
that I can enter it as above?
Thanks and best regards
Martin
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Re: [PyMOL] Function signature
Hi Martin,
If you simply want to be able to have the function operate on any
selection, simply do this:
def zoom_custom(position):
cmd.zoom(position)
cmd.extend("zoom_custom", zoom_custom)
This allows you to type:
zoom_custom resi 117
or any other more complicated selection syntax without any parentheses.
Perhaps I am missing something in your specific requirements?
Cheers,
Rob
On Sun, 2016-04-17 20:18 +0200, Martin
Hediger wrote:
> Dear all
>
> In PyMOL, the syntax for eg. zooming in on residue 110 of a protein
> would be
>
> zoom resi 117
>
> I have a pymol script where I define a function that also zooms in on
> a residue (it's simple, only to illustrate the point):
>
> def zoom_custom(position):
> cmd.zoom("resi" + " " + str(position))
> cmd.extend("zoom_custom", zoom_custom)
>
> However, when I want to call it from the PyMOL promt, i have to use
>
> zoom_custom(117)
>
> i.e. using parenthesis. How do i need to design the function such
> that I can enter it as above?
>
> Thanks and best regards
> Martin
>
> --
> Find and fix application performance issues faster with Applications
> Manager Applications Manager provides deep performance insights into
> multiple tiers of your business applications. It resolves application
> problems quickly and reduces your MTTR. Get your free trial!
> https://ad.doubleclick.net/ddm/clk/302982198;130105516;z
> ___
> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
> Archives:
> http://www.mail-archive.com/pymol-users@lists.sourceforge.net
--
Robert L. Campbell, Ph.D.
Adjunct Assistant Professor
Dept. of Biomedical & Molecular Sciences, Botterell Hall Rm 644
Queen's University,
Kingston, ON K7L 3N6 Canada
Tel: 613-533-6821
http://pldserver1.biochem.queensu.ca/~rlc
--
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your business applications. It resolves application problems quickly and
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