[Rd] More strange R CMD build/check errors on Windows

2010-09-12 Thread Hervé Pagès
Hi, This is a follow up to: https://stat.ethz.ch/pipermail/r-devel/2010-July/057921.html The Bioconductor daily builds have been reporting a lot of strange things lately on Windows using R-2.12. This started 2 or 3 months ago and things are not getting better with recent R-2.12. Here is a

Re: [Rd] More strange R CMD build/check errors on Windows

2010-09-12 Thread Peter Dalgaard
On 09/12/2010 08:10 AM, Hervé Pagès wrote: ... AFAICT those problems were never seen before (i.e. with R 2.12). They show up randomly everyday for a small number of packages (between 10 and 20 out of 400). The set of victims changes everyday and any package seems to be a potential victim

Re: [Rd] More strange R CMD build/check errors on Windows

2010-09-12 Thread Hervé Pagès
Hi Peter, On 09/12/2010 01:51 AM, Peter Dalgaard wrote: On 09/12/2010 08:10 AM, Hervé Pagès wrote: ... AFAICT those problems were never seen before (i.e. with R 2.12). They show up randomly everyday for a small number of packages (between 10 and 20 out of 400). The set of victims changes

[Rd] packages update and error: no package called 'lattice',Error: package 'Hmisc could not be loaded; Tinn-R

2010-09-12 Thread Patrick Giraudoux
Dear all, Since some months after updating packages via update.packages(ask='graphics'), sometimes I loose 'lattice', although already installed. At R restart, I get: Error in loadNamespace(i[[1L]], c(lib.loc, .libPaths())) : there is no package called 'lattice' Error: package 'Hmisc'

Re: [Rd] R CMD build cannot create vignettes on Windows if Makefile is used

2010-09-12 Thread Duncan Murdoch
On 12/09/2010 12:49 AM, Hervé Pagès wrote: Hi Duncan, On 09/11/2010 03:56 AM, Duncan Murdoch wrote: On 11/09/2010 12:52 AM, Hervé Pagès wrote: Hi, I found the following problem with recent R-devel (2010-08-26 r52817) on Windows (32-bit and 64-bit): 'R CMD build pkg' gets stalled during

Re: [Rd] R CMD build cannot create vignettes on Windows if Makefile is used

2010-09-12 Thread Wolfgang Huber
Hi Duncan wouldn't it be possible that by default the Sweave.sty in share/texmf is found by 'R CMD build' for use by package vignettes without manual intervention? AfaIcs this is also how it worked in the past. Best wishes Wolfgang On Sep/11/10 12:56 PM, Duncan Murdoch wrote: On

Re: [Rd] Windows build

2010-09-12 Thread pooja varshneya
Thanks Duncan !! Running 'make rsync-recommended' solved the problem. Thanks, Pooja On Fri, Sep 10, 2010 at 7:30 PM, Duncan Murdoch murdoch.dun...@gmail.com wrote: On 10/09/2010 5:05 PM, pooja varshneya wrote: Hi Folks, I am trying to build R-2.11.1 from source code on Windows 2003. I am

Re: [Rd] R CMD build cannot create vignettes on Windows if Makefile is used

2010-09-12 Thread Duncan Murdoch
On 12/09/2010 12:04 PM, Wolfgang Huber wrote: Hi Duncan wouldn't it be possible that by default the Sweave.sty in share/texmf is found by 'R CMD build' for use by package vignettes without manual intervention? Yes, it does work that way. What Hervé is talking about are cases where people

Re: [Rd] [R] scalable delimiters in plotmath

2010-09-12 Thread Paul Murrell
Hi [shifting to r-devel] On 13/09/2010 8:43 a.m., David Winsemius wrote: On Sep 12, 2010, at 4:11 PM, Paul Murrell wrote: Hi On 13/09/2010 7:57 a.m., baptiste auguie wrote: Oh, right I see. I was completely off then. Maybe it's not so easy to add delimiters after all, I'll have to look

Re: [Rd] R CMD build cannot create vignettes on Windows if Makefile is used

2010-09-12 Thread Hervé Pagès
Hi Duncan, On 09/12/2010 05:07 AM, Duncan Murdoch wrote: On 12/09/2010 12:49 AM, Hervé Pagès wrote: Hi Duncan, On 09/11/2010 03:56 AM, Duncan Murdoch wrote: On 11/09/2010 12:52 AM, Hervé Pagès wrote: Hi, I found the following problem with recent R-devel (2010-08-26 r52817) on Windows