Dear Valerie,
The 'hgvs' fields seems to break the import, so having the '
--hgvs' (or another option including this) are definitely required.
I have sent you a minimal VCF file and code to reproduce this via
e-mail. If you need more, please let me know.
Best wishes
Julian
On 02/27/2013
I think the rule is that you can do anything as long as you don't
complain. If you want to complain, you must follow the instructions.
-- Jari Oksanen in
Re: [Rd] Keeping up to date with R-devel
--
Patrick Burns
pbu...@pburns.seanet.com
twitter: @burnsstat @portfolioprobe
Has my vote!
On Thu, Feb 28, 2013 at 10:57 AM, Patrick Burns pbu...@pburns.seanet.comwrote:
I think the rule is that you can do anything as long as you don't
complain. If you want to complain, you must follow the instructions.
-- Jari Oksanen in
Re: [Rd] Keeping up to date with R-devel
Hello,
My colleagues and I use lattice for a variety of different purposes, and we
came across a couple issues involving legend.R and update.trellis.R:
1. When using xyplot, the shapes in the plots are able to have borders and fill
colours, but not so in the legend. I created a short script to
This is getting further away from typical R-devel issues, but let me add
another perspective: the `n' in BIC reflects the rate at which the information
in the log-likelihood grows.
Ravi
-Original Message-
From: r-devel-boun...@r-project.org [mailto:r-devel-boun...@r-project.org] On
On Thu, 28 Feb 2013, Joris Meys wrote:
Has my vote!
Mine as well :-)
Added to the devel-version on R-Forge now.
thx,
Z
On Thu, Feb 28, 2013 at 10:57 AM, Patrick Burns pbu...@pburns.seanet.comwrote:
I think the rule is that you can do anything as long as you don't
complain. If you want to
For a package providing 'virtual' data.frames backed by MonetDB database
tables, we want to make some functions generic, to implement versions that
work on single or multiple database columns.
My approach was
sd - function(x, na.rm=TRUE,...) UseMethod(sd)
sd.default- base::sd
I've done that
On Thu, Feb 28, 2013 at 3:44 PM, Gabor Grothendieck
ggrothendi...@gmail.com wrote:
This issues a message about a needing to be non-negative as expected:
setClass(A,
representation = list(a = numeric),
prototype = list(a = 0),
validity = function(object) {
out - if (object@a 0) a
This issues a message about a needing to be non-negative as expected:
setClass(A,
representation = list(a = numeric),
prototype = list(a = 0),
validity = function(object) {
out - if (object@a 0) a must be non-negative
if (is.null(out)) TRUE else out ##
})
new(A, a = -1)
but it
Le mercredi 27 février 2013 à 18:59 -0500, John Fox a écrit :
Dear Milan and Steven,
At the risk of muddying the water further, I think that the potential
confusion here is that Poisson GLMs are applied in two formally
equivalent but substantively different situations: (1) where the
counts
On Feb 28, 2013, at 5:09 PM, Bunny wrote:
Dear devel-listers,
I found a conflct between rJava and data.table. Actually me questions is
where to report it?
Should I rather send it directly to the package maintainers or post it on
some bug tracker.
The problem is that data.table has a
Hi,
On Thu, Feb 28, 2013 at 5:09 PM, Bunny bu...@lautloscrew.com wrote:
Dear devel-listers,
I found a conflct between rJava and data.table. Actually me questions is
where to report it?
Should I rather send it directly to the package maintainers or post it on
some bug tracker.
The problem
Ugh, sorry, I meant to say:
On Thu, Feb 28, 2013 at 8:49 PM, Steve Lianoglou
mailinglist.honey...@gmail.com wrote:
[snip]
The development version of data.table no longer exports J from, but
once could still use J inside data.tabe[ ... ] calls.
The development version of data.table no longer
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