Re: [R-pkg-devel] [External] Assistance Needed to Resolve CRAN Submission Note

ersion") HTML Tidy for Apple macOS version 5.8.0 > On May 19, 2024, at 01:30, Ivan Krylov wrote: > > On Sat, 18 May 2024 21:10:18 + > "Richard M. Heiberger" wrote: > >> when checking a package and discovering these messages about html5, >> can you

Re: [R-pkg-devel] [External] Re: [External] Re: Assistance Needed to Resolve CRAN Submission Note

n't think that will ever happen. It only happens when a user tries an > "--as-cran" check, but doesn't have a current version of tidy installed. > CRAN does have the up-to-date versions installed, so they won't see this. > > Duncan Murdoch > >> On 2024-05-

Re: [R-pkg-devel] [External] Re: Assistance Needed to Resolve CRAN Submission Note

this is a suggestion to CRAN. when checking a package and discovering these messages about html5, can you generate an informational message about tidy with a link to updating tidy? thank you Rich Sent from my iPhone > On May 17, 2024, at 15:32, Marc Girondot via R-package-devel > wrote: > >

Re: [R-pkg-devel] [External] Removing import(methods) stops exporting S4 "meta name"

this looks like a relative of the issue I tripped on that is discussed in the email threads https://stat.ethz.ch/pipermail/r-package-devel/2024q1/010531.html https://stat.ethz.ch/pipermail/r-devel/2024-March/083259.html At issue is the default export of exportPattern(".") System generated

Re: [R-pkg-devel] [External] [External] RcmdrPlugin.HH_1.1-48.tar.gz

quot;) ? > On Mar 6, 2024, at 11:57, Joshua Ulrich wrote: > > On Wed, Mar 6, 2024 at 1:03 AM Richard M. Heiberger wrote: >> >> Thank you Duncan, Jeff, Ivan. >> >> I did all that Duncan and Jeff suggested, plus a bit more that appeared to >> be necessary. &g

Re: [Rd] [External] Never exporting .__global__ and .__suppressForeign__?

Ivan, thank you for including me on this thread on R-devel. Please be sure to see the last email in my R-pkg-devel thread on RcmdrPlugin.HH_1.1-48.tar.gz, in which I discuss how I responded to this issue, specifically to my detailed discussion in the RcmdrPlugion.HH/NEWS. Rich > On Mar 6,

Re: [R-pkg-devel] [External] RcmdrPlugin.HH_1.1-48.tar.gz

in the NEWS file, perhaps augmented with Ivan's comments, might be added to utils/man/globalVariables.Rd and to the " section ‘Package structure’ in the ‘Writing R Extensions’ manual. " > On Mar 6, 2024, at 01:38, Ivan Krylov wrote: > > В Tue, 5 Mar 2024 22:41:32 + > "R

Re: [R-pkg-devel] [External] RcmdrPlugin.HH_1.1-48.tar.gz

are explicitly included. What should I try next? > On Mar 5, 2024, at 18:21, Duncan Murdoch wrote: > > On 05/03/2024 5:41 p.m., Richard M. Heiberger wrote: >> My package is being rejected by auto-check >> Flavor: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_6

[R-pkg-devel] RcmdrPlugin.HH_1.1-48.tar.gz

My package is being rejected by auto-check Flavor: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64 Check: for missing documentation entries, Result: WARNING Undocumented code objects: '.__global__' All user-level objects in a package should have documentation entries. See chapter

Re: [R-pkg-devel] [External] circular suggested packages

Why are these functins in two different packages? On the surface it looks like qrcode is a transformation function and opencv is its inverse. > On Nov 7, 2023, at 14:55, Thierry Onkelinx wrote: > > Dear all, > > The qrcode package converts text into a qrcode image. The opencv package is > able

[R-pkg-devel] is this expected behavior

I have a demo file that uses a function defined in the package. when I force the demo to be run with R CMD check --test-dir=demo findme_1.0.tar.gz then the function defined in the package is not recognized. Here is the demo/findme.r file: findme::findme() findme() Here is the result of: R CMD

[R-pkg-devel] escaped latex specials

There is a new NOTE. This line with \& used to be acceptable. I am not seeing what the suggested replacement is. * checking Rd files ... [4s] NOTE checkRd: (-1) bivariateNormal.Rd:42: Escaped LaTeX specials: \& The full example is \note{ Based on the \code{galaxy} example on pages 204--205 in

Re: [R-pkg-devel] [External] Formula modeling

I am responding to a subset of what you asked. There are packages which use multiple formulas in their argument sequence. What you have as a single formula with | as a separator q | p | subject | time | rho ~ p + x + y | p + w + y | z + y I think would be better as a comma-separated list of

Re: [R-pkg-devel] [External] R package submission fails due to using LaTeX functions that have not been implemented for building pdfs (not due to mathjaxr)

> One more question. If I use mjeqn at the beginning of a paragraph it > automatically sets a line break afterwards. > Any idea what I can do to prevent this? follow it with \vspace*{1ex} to back up one line. Rich > On Jun 25, 2021, at 07:51, Marc Scherstjanoi > wrote: > > Hi Wolfgang,

Re: [R-pkg-devel] An invalid URLs

Is it perhaps an https:// address? You browser will make the adjustment. CRAN will give this message. On Thu, Mar 12, 2020 at 10:08 PM jared_wood wrote: > > I write an URL of MalaCards (a database) in my description, because I need > the data in this database. However, there is an error here

Re: [R-pkg-devel] no visible binding for '<<-' assignment note

I would guess that your NAMESPACE file doesn't export dnormfun. On Fri, Feb 21, 2020 at 1:38 PM Weimin Zhang wrote: > > Thank you Max. > > The reason I used the super assignment "<<-" is because the "dnormfun" > function later called by function kronecker(X, Y, FUN = "*",...) through > FUN="

Re: [R-pkg-devel] Private S3 Method not Found

or a table: > > > > \begin{table}[!tbp] > > \begin{center} > > \begin{tabular}{l} > > \hline\hline > > \multicolumn{1}{c}{}\tabularnewline > > \hline > > ~\tabularnewline > > a\tabularnewline > > b\tabularnewline > > \hline > > \end{tabu

Re: [R-pkg-devel] Private S3 Method not Found

Please be consistent with the latex() function in the Hmisc package. For example, for an array x, latex (x) produces a complete latex table environment. See the ?latex helpfile for details. Rich On Mon, Feb 17, 2020 at 10:07 wrote: > Hello, > > > > I'm working on a function in a package that

Re: [R-pkg-devel] inconsistent behavior between R CMD check and interactive use

indows in R-devel when running --as-cran. It > doesn't happen in R-devel on MacOS with or without --as-cran, and I > don't think it happens on Windows without --as-cran (but it might just > be that there are no symptoms of testing the wrong version in that case). > > A workaround is to exp

Re: [R-pkg-devel] inconsistent behavior between R CMD check and interactive use

se to try. Rich On Sun, Dec 8, 2019 at 4:58 PM Duncan Murdoch wrote: > > On 08/12/2019 3:14 p.m., Richard M. Heiberger wrote: > > I am seeing this in > >> version > > _ > > platform x86_64-w64-mingw32 > > arch x86_64 > >

[R-pkg-devel] inconsistent behavior between R CMD check and interactive use

I am seeing this in > version _ platform x86_64-w64-mingw32 arch x86_64 os mingw32 system x86_64, mingw32 status Under development (unstable) major 4 minor 0.0 year 2019 month 12 day05 svn

Re: [Rd] inappropriate warning in latticeExtra

day03 svn rev77513 language R version.string R Under development (unstable) (2019-12-03 r77513) nickname Unsuffered Consequences Rich On Sat, Jun 15, 2019 at 3:13 AM Deepayan Sarkar wrote: > > On Fri, Jun 14, 2019 at 6:42 PM Richard M. Heiberg

Re: [Rd] inappropriate warning in latticeExtra

Yes. You identified it a while ago and Deepayan wrote that he fixed it on r-forge a year ago. It still isn't on cran. On Fri, Jun 14, 2019 at 16:04 Duncan Murdoch wrote: > On 14/06/2019 9:12 a.m., Richard M. Heiberger wrote: > > This is still not repaired in > > R version 3.6.

Re: [Rd] inappropriate warning in latticeExtra

AM Deepayan Sarkar wrote: > > On Fri, Mar 23, 2018 at 7:58 AM, Richard M. Heiberger wrote: > > The warning message in the last line of this email is incorrect. > > This is behavior which Duncan Murdoch labeled a bug in > >https://stat.ethz.ch/pipermail/r-help/2017-December/

Re: [R-pkg-devel] Trying to work around missing functionality

Does this solve the problem? if (getRversion() >= '2.15.1') globalVariables(c('envroot')) I keep this in file R/globals.R I learned of this from John Fox's use in Rcmdr. On Mon, Aug 27, 2018 at 8:28 PM, J C Nash wrote: > In order to track progress of a variety of rootfinding or optimization

[Rd] inappropriate warning in latticeExtra

The warning message in the last line of this email is incorrect. This is behavior which Duncan Murdoch labeled a bug in https://stat.ethz.ch/pipermail/r-help/2017-December/450494.html This is a fresh install of R-devel (2018-03-21 r74436) R Under development (unstable) (2018-03-21 r74436)

Re: [R-pkg-devel] Latex error during compilation

Sounds like a missing "}". Which could mean the brace is inside quotes or following a "%" On Tue, Mar 6, 2018 at 09:17 michael tsagris via R-package-devel < r-package-devel@r-project.org> wrote: > > > > -- Forwarded message -- > From: michael tsagris > To:

Re: [Rd] debuggingState() analogous to tracingState() ?

Interesting timing. I could have used this additional control yesterday in class. I am teaching a graduate Statistical Computing class. Last night I went through the symbolic deriviatives (the deriv and D functions) in Section 9.6 of the Blue Book. The D function is recursive. I illustrated

[Rd] warning in lattice key function

## this example shows a problem in key. tmp - data.frame(y=rnorm(10), g=rep(ordered(c(A,B)), 5)) bwplot(y ~ g, data=tmp, key=list( text=list(c(A,B), col=c(blue,red)), points=list(pch=c(17, 16), col=c(blue,red)), space=top, columns=2, border=TRUE,

Re: [Rd] [R] any updates w.r.t. lapply, sapply, apply retaining classes

Mike, On time classes specifically, the lubridate package with documentation Garrett Grolemund, Hadley Wickham (2011). Dates and Times Made Easy with lubridate. Journal of Statistical Software, 40(3), 1-25. http://www.jstatsoft.org/v40/i03/. solves many confusion problems. Does it handle the

[Rd] Rd cross-references ... WARNING in R-2.10.*

I have observed a difference in behavior of R CMD check in older R vs R-2.10.x on windows. * using R version 2.10.0 (2009-10-26) * using R version 2.10.1 RC (2009-12-14 r50718) 2.10 seems to be looking on the internet for crossreferenced packages. I am not sure why it is looking. The string pkg

[Rd] newly introduced lattice bug

library(lattice) xyplot(rnorm(10) ~ rnorm(10) | factor(1:10), layout=c(2,3)) version _ platform i386-pc-mingw32 arch i386 os mingw32

[Rd] problems in installing packages with R version 2.4.0 alpha (2006-09-05 r39134)

I just downloaded the windows version R version 2.4.0 alpha (2006-09-05 r39134) 1. When I downloaded the packages, the following two were not found. utils:::menuInstallPkgs() --- Please select a CRAN mirror for use in this session --- dependency ''fCalendar'' is not available dependency

Re: [Rd] Two submitted packages

From: Prof Brian Ripley There is no '2.4.1', and your R-devel is not very recent. Apologies on the typo and the two-week old 2.4.0dev. I just downloaded version 2.4.0 Under development (unstable) (2006-09-04 r39086) 1. You set cpv$clip - off and the internal code assumes that it is

[Rd] enhancement request for labeling help windows in Windows

I would like to make a formal request for an enhancement. The default help for RGui in 2.4.0dev seems to be the .chm format outside of the RGui frame. Previously the default help was individual windows inside the RGui frame. Every package in R has its own help file and all of them are labeled

Re: [Rd] enhancement request for labeling help windows in Windows

I am looking at the HTML Help Workshop which I got from wherever your website told me to get it. There is no documentation in the material I have. My guess is that one of the variables in the file c:/Program Files/HTML Help Workshop/include/htmlhelp.h needs to be changed. My first guess is

Re: [Rd] Two submitted packages

Deepayan wrote: xyplot(y ~ x | a, data=tmp, ylim=c(1.5,4.5), par.settings = list(clip = list(panel = off)), layout=c(2,2)) I'm curious to know why this functionality is not enough. ## 1. Here is a more realistic example. tmp - data.frame(x=1:5, y=1:5,

Re: [Rd] Two submitted packages

## This example runs in R 2.3.1 and does not run in R 2.4.1. I am ## raising it here for two questions: one on how to debug functions ## inside a namespace, the other on how to control clipping. tmp - data.frame(x=1:5, y=1:5, a=factor(c(1,1,1,1,1), levels=1:4)) xyplot(y ~ x, data=tmp,