Re: [Rd] [External] Re: [R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread luke-tierney
Thanks; fix committed in r80654. Best, luke On Thu, 22 Jul 2021, Bill Dunlap wrote: A small example of the problem is  #define USE_RINTERNALS 1 #include #include #include static s_object* obj = NULL; Prior to 2021-07-20, with svn 80639, this compiled but after, svn 80647, that I get $

Re: [Rd] [R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread Bill Dunlap
A small example of the problem is #define USE_RINTERNALS 1 #include #include #include static s_object* obj = NULL; Prior to 2021-07-20, with svn 80639, this compiled but after, svn 80647, that I get $ gcc -I"/mnt/c/R/R-svn/trunk/src/include" -I. -I/usr/local/include -fpic -g -O2 -flto -c

Re: [R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread Iñaki Ucar
Hi, On Thu, 22 Jul 2021 at 15:51, Hannah Owens wrote: > > Hi all, > I am working on an update to a package I have on CRAN called occCite. My > latest release attempt didn’t pass incoming automated checks, because there > is an outstanding error. Additionally, there are some weird notes I would >

Re: [R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread Duncan Murdoch
On 22/07/2021 10:03 a.m., Iñaki Ucar wrote: Hi, On Thu, 22 Jul 2021 at 15:51, Hannah Owens wrote: Hi all, I am working on an update to a package I have on CRAN called occCite. My latest release attempt didn’t pass incoming automated checks, because there is an outstanding error.

[R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread Hannah Owens
Hi all, I am working on an update to a package I have on CRAN called occCite. My latest release attempt didn’t pass incoming automated checks, because there is an outstanding error. Additionally, there are some weird notes I would like to get rid of, if anyone has suggestions. The killing error

Re: [R-pkg-devel] Tracking down inconsistent errors and notes across operating systems

2021-07-22 Thread Bill Dunlap
I think the problem with RPostgreSQL/sec/RS-DBI.c comes from some changes to Defn.h and Rinternals.h in RHOME/include that Luke made recently (2021-07-20, svn 80647). Since then the line #define s_object SEXPREC in Rdefines.h causes problems. Should it now be 'struct SEXPREC'? -Bill On

[Bioc-devel] upstream has disappeared

2021-07-22 Thread Michael Shapiro
I am trying to push changes to the citation in my package deltaCaptureC Previously when I ran git remote -v I was able to see both the origin and the upstream. I now only see origin. Likewise, running git fetch upstream fails with fatal: 'upstream' does not appear to be a git

Re: [Bioc-devel] upstream has disappeared

2021-07-22 Thread Kern, Lori
I'm not sure why it would disappear but you can simply reset it with git remote add upstream g...@git.bioconductor.org:packages/deltaCaptureC then you should see it again and you could do git fetch upstream Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center