Re: [Rd] string concatenation operator (revisited)

2021-12-10 Thread Grant McDermott
Sorry I haven't had a chance to reply to anyone. I feel like I dropped a grenade in a room and promptly bolted... Just to say, then, that I really appreciate everyone's comments and suggestions. While I'm tempted to push back on some points, I don't think it's worth on balance, or will add

Re: [Bioc-devel] Git recognizes me but denies access

2021-12-10 Thread Vincent Carey
How are we doing with this? Can destiny be maintained? Do we need more git assistance? I am told the package is not passing check in 3.14. On Thu, Nov 18, 2021 at 4:24 AM Philipp A. wrote: > My addresses are phil.ange...@gmail.com (not philipp) and > flying-sh...@web.de. > > I’ll add a key as

Re: [R-pkg-devel] R-package-devel Digest, Vol 80, Issue 7

2021-12-10 Thread Eric Weine
I don't think that is related. I just updated to the newest version of R (4.1.2) and that resolved the issue. Thank you for your time! Eric. On Fri, Dec 10, 2021 at 11:56 AM Duncan Murdoch wrote: > On 10/12/2021 11:08 a.m., Eric Weine wrote: > > That does not solve the issue. > > > > First,

Re: [R-pkg-devel] R-package-devel Digest, Vol 80, Issue 7

2021-12-10 Thread Duncan Murdoch
On 10/12/2021 11:08 a.m., Eric Weine wrote: That does not solve the issue. First, the html file that's already there is what is desired. But I believe that regardless R CMD will rebuild the package vignettes from scratch. I tried removing the html and recreating the package but I end up with

Re: [R-pkg-devel] R-package-devel Digest, Vol 80, Issue 7

2021-12-10 Thread Eric Weine
That does not solve the issue. First, the html file that's already there is what is desired. But I believe that regardless R CMD will rebuild the package vignettes from scratch. I tried removing the html and recreating the package but I end up with the same result in the .tar.gz file. The central

Re: [R-pkg-devel] R-package-devel Digest, Vol 80, Issue 7

2021-12-10 Thread Duncan Murdoch
Just delete the .html output from earlier runs before you run R CMD build, and it will have no choice but to rebuild them. Duncan Murdoch On 10/12/2021 9:29 a.m., Eric Weine wrote: Hello, Sorry yes, I think that my initial post on stack overflow is a bit misleading. I have checked the file

Re: [R-pkg-devel] R-package-devel Digest, Vol 80, Issue 7

2021-12-10 Thread Eric Weine
Hello, Sorry yes, I think that my initial post on stack overflow is a bit misleading. I have checked the file that is built when I run "R CMD build ...", and it looks like what is on CRAN. The question is why is that different from when I run "devtools::build_vignette" or when I just knit the

Re: [R-pkg-devel] R Vignette Knitting Issues in CRAN Release

2021-12-10 Thread Duncan Murdoch
On 09/12/2021 5:41 p.m., Simon Urbanek wrote: Eric, did you check the contents of the package file you submitted? The session info in the vignette is quite old, and the build has been packaged by you so I don't think it has anything to do with CRAN, but to make sure, check the file you