Re: [Rd] Problem installing RCurl

Hi Jun On 12/3/10 2:15 PM, Zhang,Jun wrote: I have 64-bit R 2 12 0 installed on Solaris 10 of Sun Sparc. When I tried to install RCurl, it failed with the following lines, ... Version has CURLOPT_SSL_SESSIONID_CACHE libcurl version: libcurl 7.19.6 configure: creating

Re: [Rd] getNativeSymbolInfo(user_unif_rand) returns different results on windows and linux

Hi Renaud I cannot presently step through the code on Windows to verify the cause of the problem, but looking at the code, I would _presume_ the reason is that symbol lookup is cached on Windows but not on Linux or OS X (at least by default). Thus when we perform the second search for

Re: [Rd] configure fail for XML package on freebsd

Hi Hiroyuki Hiroyuki Kawakatsu wrote: Hi, I am having problems installing the XML package with R-devel on freebsd. If I simply do install.packages(XML), it says that the parser.h file is not found. After reading the INSTALL file, I have set setenv XML_CONFIG /usr/local/bin/xml2-config

Re: [Rd] RGoogleDocs so close but errors with spreadsheet reading

You might try my development version which I put at http://www.omegahat.org/Prerelease/RGoogleDocs_0.2-0.tar.gz I am not certain if there are any substantive differences with the one in the Omegahat repository, but it works for me with a document and a spreadsheet in an Google Docs account.

Re: [Rd] R_CallMethodDef: 'type' and 'style' fields?

Steve Jaffe wrote: In Writing R Extensions it is said that R_CallMethodDef has two optional fields, 'type' and 'style' (where 'style' is said to distinguish in/out/inout arguments). Can you point us to the particular section and line that says this. I think it is for the R_CMethodDef

Re: [Rd] Segmentation faults on SEXP conversion

nabble.30.miller_2...@spamgourmet.com wrote: On Sun, Nov 15, 2009 at 2:52 PM, Duncan Murdoch - murd...@stats.uwo.ca +nabble+miller_2555+1412c7fca2.murdoch#stats.uwo...@spamgourmet.com wrote: On 15/11/2009 1:41 PM, nabble.30.miller_2...@spamgourmet.com wrote: The character type in R

Re: [Rd] WISH: R CMD build should use the (correct) package name (PR#9266)

- -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.3

Re: [Rd] Request to open up getConnection to embedded interface

the default stdin, stdout, stderr reading and writing routines to test for the existence of user provided routines, similar to the way stdout_vfprintf tests R_Outputfile. Jeff - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782

Re: [Rd] Automatic C wrapper generation

- -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP SIGNATURE- Version: GnuPG

Re: [Rd] Error condition in evaluating a promise

__ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University

Re: [Rd] [R] multithreading calling from the rpy Python package

/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP

Re: [Rd] dyn.load (PR#9364)

/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences

Re: [Rd] dyn.load (PR#9364)

/Library/Frameworks/R.framework/ Resources/lib/ppc -lR -dylib_file libRblas.dylib:/Library/Frameworks/ R.framework/Resources/lib/ppc/libRblas.dylib loaded DLL/SO first attempt [1] Failed On 16/nov/06, at 00:07, Duncan Temple Lang wrote: I was just testing this myself on various

Re: [Rd] dyn.load and function calls without 'PACKAGE' argument

? Jeff __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building

Re: [Rd] include libraries for C code called from R

, Michael Braun MIT Sloan School of Management [EMAIL PROTECTED] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work

Re: [Rd] Connections to https: URLs -- IE expert help needed

strongly suspect many more that will arise. D. - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616

Re: [Rd] Connections to https: URLs -- IE expert help needed

Kurt Hornik wrote: Duncan Temple Lang writes: -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Prof Brian Ripley wrote: I've added to R-devel the ability to use download.file() and url() to https: URLs, *only* if --internet2 is used on Windows. This uses the Internet Explorer

Re: [Rd] Connections to https: URLs -- IE expert help needed

Prof Brian Ripley wrote: On Mon, 1 Jan 2007, Duncan Temple Lang wrote: Kurt Hornik wrote: Duncan Temple Lang writes: -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Prof Brian Ripley wrote: I've added to R-devel the ability to use download.file() and url() to https: URLs, *only

Re: [Rd] wishlist: additional argument in R_tryEval (Rinternals.h)

Hi Deepayan. It is not part of the API, but it is used in numerous packages that would break if such a change were made. It is an easy change to make, but not necessarily a robust approach if we keep adding parameters. If we need the room to add more, using a structure whose fields are modified

Re: [Rd] help with Qt and event loops

://dsarkar.fhcrc.org/R/R-Qt.html Thanks, -Deepayan __ [EMAIL PROTECTED] mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210

Re: [Rd] Embedding R and registering routines

://biostat.mc.vanderbilt.edu/JeffreyHorner __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210

Re: [Rd] Embedding R and registering routines

for the feedback. D. Cheers, Simon On May 1, 2007, at 1:56 PM, Duncan Temple Lang wrote: Jeffrey Horner wrote: Hello, The use of .Call and the like all depend on loading shared libraries and registering routines from it. Also, .Primitive and .Internal depend on routines being

Re: [Rd] Embedding R and registering routines

such as add to embed into R, we are loate to take it out and we live with these constraints for a long time. But in this case, it is not a big deal, so please go ahead if you have the time and want to. Thanks, D. Cheers, Simon On May 1, 2007, at 4:24 PM, Duncan Temple Lang wrote

Re: [Rd] Embedding R and registering routines

complex in subsequent steps. I think we have data on that ... :-) Cheers, Simon On May 1, 2007, at 5:47 PM, Duncan Temple Lang wrote: Simon Urbanek wrote: Duncan, are you going to take care of this? I have a quick solution for R- devel that adds a special entry if requested

Re: [Rd] XML parsing under R / Extracting nodes’ va lues

You can use getNodeSet() as Hin-Tak suggests. But you will need to do it for each of the target nodes. So you can use sapply() to loop over these. However, if these nodes are all children of the same XML node, you can get the values as # This is the document content. z =

Re: [Rd] cleanup and Makevars

Hi Kasper This is not an immediate solution for your problem, but a suggestion that the ideal solution might be different from what you are asking for. In many projects, when we need to compile the same source file for two or more different purposes (e.g. architectures, compilation flags,

Re: [Rd] Ryacas check

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Duncan Temple Lang wrote: Gabor Grothendieck wrote: When I do Rcmd check Ryacas on my Windows Vista system under R version 2.6.0 beta (2007-09-23 r42958) it checks out fine but here: http://cran.r-project.org/bin/windows

Re: [Rd] Sweave/ESS-like tools for HTML

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Hi Doug. This is probably more than you want - either to know or to use for your specific task, but I'll throw it out there for general information. I write documents using XML, specifically an extended version of Docbook with elements for

Re: [Rd] How to create Web service in R?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Rohan7 wrote: Hello all, Is it possible to create web service in R? Any links or book i can refer! My second question is i'm trying to call a web service using RCurl package. The pdf from google doesnt have entire code in it.[ R

Re: [Rd] Decompressing raw vectors in memory

I understand the desire not to have any dependency on additional packages, and I have no desire to engage in any mine's better exchanges. So write this just for the record. The gzunzip() function handle this. library(RCurl); library(Rcompression) val = getURLContent(http://httpbin.org/gzip;)

Re: [Rd] setting global options for a package

Or slightly more conveniently, use the default value of getOption() to return the vector of color names if the option is not set, e.g. foo - function(x, heplot.colors = getOption(heplot.colors, c(red, blue, black, darkgreen, brown, darkgray)),

Re: [Rd] On RObjectTables

Hi Jeroen I am restoring the packages on the Omegahat site as people ask for them. I just put the RObjectTables package up in in its current form at http://www.omegahat.org/RObjectTables/ and am happy to enhance it as needed. We can chat off-list, if you want. D. On 7/19/12 10:30

Re: [Rd] xmlParseDoc parser errors

On 11/16/12 6:10 AM, bryan rasmussen wrote: Hi, I have some XML files that have a processing instruction directly after the XML declaration when I do kgroup.reading - character(0) for (file in file_list){kgroup.reading - xmlParseDoc(file.path(c:,projects,respositories,dk,004,file))}

Re: [Rd] question about Makeconf and nvcc/CUDA

Hi Erin Glad you are making progress on this with Brian's help. I thought I would mention a different approach that might save you some programming time and actually make the code more flexible at the same time. Basically, in a high-level language like R, it is nice to keep the code calling a

Re: [Rd] question about Makeconf and nvcc/CUDA

of Duncan Temple Lang [dtemplel...@ucdavis.edu] Sent: Thursday, July 18, 2013 9:16 AM To: r-devel@r-project.org Subject: Re: [Rd] question about Makeconf and nvcc/CUDA Hi Erin Glad you are making progress on this with Brian's help. I thought I would mention a different approach that might

Re: [Rd] question about Makeconf and nvcc/CUDA

From: Duncan Temple Lang [dtemplel...@ucdavis.edu] Sent: Thursday, July 18, 2013 1:09 PM To: Hodgess, Erin Cc: r-devel@r-project.org Subject: Re: [Rd] question about Makeconf and nvcc/CUDA Hi Erin It appears that there is only one file in src that is compile

Re: [Rd] Adding text comments to graphics device output files?

Hi Henrik I have some extensions of Simon U's png package to read and write metadata elements for PNG. They are at https://github.com/duncantl/png.git When I have time to completely test them, maybe Simon may incorporate them. D. On 7/30/13 7:59 PM, Henrik Bengtsson wrote: Hi,

Re: [Rd] C/C++ 'assert' should not be used in R packages

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Duncan Murdoch wrote: Prof Brian Ripley wrote: Please don't use 'assert' in R packages. If called, this means that an error in your code aborts the whole R process, including your user's work. I see several R packages doing this, and one of

Re: [Rd] C/C++ 'assert' should not be used in R packages

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Duncan Murdoch wrote: On 10/11/2007 1:00 PM, Duncan Temple Lang wrote: Duncan Murdoch wrote: Prof Brian Ripley wrote: Please don't use 'assert' in R packages. If called, this means that an error in your code aborts the whole R process

Re: [Rd] Finding windows DLLs

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 While I don't disagree with the general need to provide an interface to SetDllDirectory, etc., I think the discussion about 3rd party libraries has slightly missed the more obvious solution. Instead of using a DLL, such packages can link against a

Re: [Rd] Finding windows DLLs

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Prof Brian Ripley wrote: On Tue, 8 Jan 2008, Duncan Temple Lang wrote: -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 While I don't disagree with the general need to provide an interface to SetDllDirectory, etc., I think the discussion about

Re: [Rd] [rfc] Package to access the internal zlib library.

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 There is also the Rcompression library from www.omegahat.org/Rcompression and directly available via install.packages() from the www.omegahat.org/R repository. This deals with various compression schemes and does things in memory. Hopefully

Re: [Rd] swig 1.3.35 R - is the R wrapper still maintained and of interest?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Hi Michael and Soeren ~ I've waited to see if there would be posts from others, but am a little surprised to see only your two. It would seem people aren't using SWIG for R and I wonder why this community hasn't used or wanted such tools? Do we

Re: [Rd] swig 1.3.35 R - is the R wrapper still maintained and of interest?

-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dirk Eddelbuettel wrote: | Duncan, | | On 20 April 2008 at 05:44, Duncan Temple Lang wrote: | | ~ I've waited to see if there would be posts from others, but am | | a little surprised to see only your two. It would seem people aren't | | using

Re: [Rd] [R] [BioC] RCurl loading problem with 64 bit linux distribution

Kimpel [EMAIL PROTECTED]toLoyal Goff [EMAIL PROTECTED], | [EMAIL PROTECTED], | [EMAIL PROTECTED], | dateTue, May 6, 2008 at 9:18 PM | | | On Wed, May 7, 2008 at 12:43 AM, Duncan Temple Lang | [EMAIL PROTECTED] | wrote: | | | Hi all | | ~ I'm glad this made it to R-help (or R-devel) so that I saw

Re: [Rd] why is \alias{anRpackage} not mandatory?

FWIW, I'll note that one or two of us are working on a documentation system that uses XML and specifically extensions of Docbook to create documentation for R objects and that transparently extends to general articles, vignettes, books, etc. and dynamic and interactive reproducible documents.

Re: [Rd] Computing minimal detectable differences for general ANOVA models

Ali Baharev wrote: Dear Developers, I would like to contribute to the R Project. I implemented a C function the can be used to calculate minimal detectable differences for general ANOVA models (sample size calculations, power analysis). A demo program and the source code is available from

Re: [Rd] Computing minimal detectable differences for general ANOVA models

Ali Baharev wrote: Dear Developers, For the attached (very simple) source package i get the following warnings: * checking foreign function calls ... WARNING Foreign function calls without 'PACKAGE' argument: .C(fpow, ...) See the chapter 'System and foreign language interfaces' of the

Re: [Rd] RSPython

Hi David. (Sorry about not replying to your earlier mail. I have been rather busy in the last few days.) David Scherrer wrote: Hi all, I try to utilize RSPython to invoke Python from R. For me it works pretty fine for basic applications, but I have 3 problems that may be related. (1) I

Re: [Rd] IPC

+61 409 277 641 __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 371 Kerr Hall fax

Re: [Rd] About R variable references

here and call myexec() periodically... __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel -- Duncan Temple Lang

Re: [Rd] Fwd: R and Java

Laurent Jourdren wrote: I am a grad student and am working on a project where i need to integrate java and R. I have a front end in java and i need to call R functions and be able to dispaly the plots and graphs produced by R on my java front end. I came across some tools like SJava and

Re: [Rd] .Net Framework Wrapper

Madison WI, 53706 608-265-5623 [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department

Re: [Rd] [R-gui] R GUI considerations (was: R, Wine, and multi-threadedness)

@stat.math.ethz.ch https://stat.ethz.ch/mailman/listinfo/r-sig-gui - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 371 Kerr Hall fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616

Re: [Rd] Rgnome depends on obsolete components libglade/libxml (PR#8247)

/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 371 Kerr Hall fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP SIGNATURE- Version

Re: [Rd] segfault following a detach

://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 371 Kerr Hall fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP SIGNATURE

Re: [Rd] cairo anyone?

-- The Librarian __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax

Re: [Rd] .Call not counting parameters consistently (PR#8450)

Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA -BEGIN PGP SIGNATURE- Version: GnuPG v1.4.2 (Darwin

Re: [Rd] Wish list

. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752

Re: [Rd] multiple packages using the same native code.

__ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department

Re: [Rd] Stack checking, core dumps, and embedding R

mailing list https://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA

Re: [Rd] R CMD check: non source files in src on (2.3.0 RC (2006-04-19 r37860))

://stat.ethz.ch/mailman/listinfo/r-devel - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210 Mathematical Sciences Building fax: (530) 752-7099 One Shields Ave. University of California at Davis Davis, CA 95616, USA

Re: [Rd] reusing routines

Hi Terry. If I am inferring correctly from your description, in S-Plus your C code for the microarray automatically finds the cholesky2 routine in the survival package without any need to tell it to do so. While it may be convenient, this is not very desirable at all. Rather, you should have to

Re: [Rd] compiling tests/Embedding

In addition to the compiler issues, the test should also be changed. It should use R_tryEval() directly rather than Test_tryEval(). The test preceeds the existence of that exported routine that was motivated by the same usage that gave rise to this test. I'll commit an update when I get a few

[Rd] iSPlots paper

need minor tweaking, or else I'll just say great, go ahead and send it. The only thing that is obviously missing - from the copy I just printed, at least - is an abstract. - -- Duncan Temple Lang[EMAIL PROTECTED] Department of Statistics work: (530) 752-4782 4210

Re: [Rd] cummax / cummin for complex numbers

I believe Michael's point is that the error messages are incorrect - referring to cunmax when cunmin was called and vice verse. D. On 7/14/14, 8:14 AM, Ben Bolker wrote: Michael Haupt michael.haupt at oracle.com writes: Dear all, in R 3.1.0, this is happening: cummin(c(1+1i,2-3i,4+5i))

Re: [Rd] Is this an incorrect use of the R-API?

Hi Utkarsh If the package is an experiment and exploration, great - good for you getting into this level of detail. However, if your goal is to get the dynamic prompt, a simpler mechanism that is almost equivalent is the R code invisible(addTaskCallback(function(...) {

Re: [Rd] Significant memory leak when using XML on Windows

Janko and I have been in touch. This is, I believe, a Windows specific issue and a compilation issue. I could be wrong, but that is my impression from other reports. When I have time (?! :-)), I will deal with it. Hopefully this will be very soon. Thanks Janko. D. On 12/14/14, 7:54 PM,

Re: [Rd] iterated lapply

Use force() (or anything that evaluates mycondition, e.g. your print): function(mycondition) { force(mycondition) function(i) mycondition * i } within the lapply() loop. Not a bug, but does surprise people. It is lazy evaluation. D. On 2/23/15 12:57 PM, Daniel Kaschek wrote: Hi

Re: [Rd] RObjectTables freezes in R 3.2.0 RC on 32bit systems

Thanks for the report. I'll take a look at this, but it will take a week or so before I have time. Best, Duncan On 4/14/15 6:29 PM, Jeroen Ooms wrote: We recently started noticing freezes that appear only on 32bit systems (both linux and windows) with a relatively recent versions of R 3.2.0,

Re: [Rd] Cannot Compute Box's M (Three Days Trying...)

t;> Look forward to your reply. > >> > >> I can't really answer that question, since I have no experience at all > >> in calling R from Java. But if you want to pass a parameter named "x" > >> with value 123 from Java to R, why not just construct and ev

Re: [Rd] minor problem in XML package

d]] > > ______ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Duncan Temple Lang Director, Data Science Initiative Professor of Statistics [[alternative HTML version deleted]] __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel