Re: [R] Sensitivity and Specificity

more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-he

Re: [R] confidence intervals for the difference between group means

osting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the p

Re: [R] ncol() vs. length() on data.frames

should have added: dim(x)[2L] -> length(x) Am 31.03.20 um 16:21 schrieb Prof. Dr. Matthias Kohl: Dear Ivan, if I enter ncol in the console, I get function (x) dim(x)[2L] indicating that function dim is called. Function dim has a method for data.frame; see methods("dim"). T

Re: [R] ncol() vs. length() on data.frames

ommented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www

Re: [R] How to rum Multiple ANOVA and Multiple T-test between the same groups?

ailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __

Re: [R] Paired sample t-test with mi.t.test

.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read th

Re: [R] How to install pkg when "not found" ?

-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r

Re: [R] C.D.F

-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch

Re: [R] legendre quadrature

/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https

Re: [R] joint distribution

-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http

Re: [R] Creating new instances from original ones

]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de

Re: [R] integrate function

-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

Re: [R] Convolve 2 uniform distributed variables

__ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl

Re: [R] Compare String Similarity

. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de

Re: [R] Sweave UFT8 problem

. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de

Re: [R] calculate quantiles of a custom function

, reproducible code. -- Prof. Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal

Re: [R] Defining functions inside loops

/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch

Re: [R] Package distr and define your own distribution

, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide

Re: [R] how to generate a random data from a empirical distribition

PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo

Re: [R] Robust Asymptotic Statistics (RobASt)

, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal

[R] [R-pkgs] new package RFLPtools

sequence alignment. To get a first impression try: vignette(RFLPtools) as well as library(RFLPtools) example(RFLPplot) example(RFLPrefplot) Best regards, Fabienne Alexandra Matthias -- Dr. Matthias Kohl www.stamats.de ___ R-packages mailing list r-packa

[R] [R-pkgs] new version of RobASt-family of packages

in ExamplesEstimation.R in folder scripts Best Peter Matthias -- Dr. Matthias Kohl www.stamats.de ___ R-packages mailing list r-packa...@r-project.org https://stat.ethz.ch/mailman/listinfo/r-packages __ R

[R] [R-pkgs] new version of distr-family of packages

an example with framed code in vignette Best Peter Matthias -- Dr. Matthias Kohl www.stamats.de ___ R-packages mailing list r-packa...@r-project.org https://stat.ethz.ch/mailman/listinfo/r-packages __ R-help@r

[R] COURSE: Introduction to Metabolomics and biomarker research

Introduction to Metabolomics and biomarker research. The course will take place in Innsbruck, 16th to 17th November 2009, and will be held in German. For more details see: http://www.gdch.de/vas/fortbildung/kurse/fortbildung2009.htm#1175 -- Dr. Matthias Kohl www.stamats.de

Re: [R] help with median for each row

search on whether there's a way to computer the median for each row of a nxn matrix and return the medians for each row for further computation. And also if the number of columns in the matrix are even, how could I specify which median to use? Thank you very much! -- Dr. Matthias Kohl

Re: [R] how to change the quantile method in bwplot

-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman

Re: [R] trouble using optim for maximalisation of 2-parameter function

commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html

Re: [R] implementing Maximum Likelihood with distrMod when only the PDF is known

? isn't it sufficient to give slot d, and then you have automatic methods implemented to get from d() to r() slots etc. is that right? Thanks a lot for your help and time ! Best, Guillaume Matthias Kohl a écrit : Dear Guillaume, thanks for your interest in the distrMod package. Regarding

Re: [R] implementing Maximum Likelihood with distrMod when only the PDF is known

likelihood by hand with numerical convolutions and optim() etc., but I would like to know how to use distr, so if there is anyone who had the same problem and solved it, I would be very grateful for the hint ! All the best, Guillaume -- Dr. Matthias Kohl www.stamats.de

Re: [R] Drawing dendrogram

-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org

Re: [R] Heatmap: draw horizontal line

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org

Re: [R] any other fast method for median calculation

}} __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de

Re: [R] Finding Lambda in Poisson distribution

. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de

Re: [R] How to normalize to a set of internal references

in a regression model), and results in overstated confidence of the final estimates by not taking into account the imprecision in the normalizing factors. Frank -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https

Re: [R] Does The Randvar package contain a virus(Malware) ?

. http://www.nabble.com/file/p22281513/qq.gif -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html

Re: [R] heatmap.2 color issue

]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl

Re: [R] Drawing from an empirical distribution

code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl

Re: [R] registering a generic method for a class

! __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de

Re: [R] Computational Probability

-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R

Re: [R] Sweave/Rweave and results=verbatim

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do

Re: [R] check if a certain ... argument has been passed on to my user-defined function

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list

Re: [R] S4 slot containing either aov or NULL

://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing

Re: [R] Mallows' distance or Earth Mover's distance in R?

recommend an alternative? Thanks Rainer -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide

Re: [R] folded normal distribution in R

-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman

Re: [R] plot - central limit theorem

commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide

Re: [R] random normally distributed values within range

/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https

Re: [R] help on sampling from the truncated normal/gamma distribution on the far end (probability is very low)

-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R

Re: [R] All possible pairs of two variables

? -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

Re: [R] fft: from characteristic funtion to density function

. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

Re: [R] Package for Tidying-up R-code

__ R-help@r-project.org mailing list https:// stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http:// www. R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de

Re: [R] Plotting horizontal dendrograms

and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting

Re: [R] Eliminating [...] from print

-- __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias

Re: [R] Heatmap.2 - eliminate cluster and dendrogram

the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE

Re: [R] Function for subset of cases/lines

code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

Re: [R] Heatmap.2 - eliminate cluster and dendrogram

message: Error in image.default(1:nc, 1:nr, x, xlim = 0.5 + c(0, nc), ylim = 0.5 + : dimensions of z are not length(x)(+1) times length(y)(+1) -Peter At 10:18 AM +0200 5/15/08, Matthias Kohl wrote: Dear Peter, heatmap.2(z, dendrogram = none, Rowv = FALSE, Colv = FALSE) should do

Re: [R] dataframes to a list

. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained

Re: [R] call function immediately before plot.new()

/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R

Re: [R] Sum of random values

. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] inverse F distribution in R?

. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.

Re: [R] mean for each row

/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https

Re: [R] multiple boxplots using boxplot

-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Dr. Matthias Kohl www.stamats.de __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide

Re: [R] likelihood from test result

Dear David, no, distrTEst won't help. It has a different intention. We are currently working on a new package distrMod (cf. https://r-forge.r-project.org/projects/distrmod/) which sometime might have such a functionality. Best, Matthias David Bickel wrote: Is there any automatic mechanism for

Re: [R] probability from different values

one addition ... Hello Ricardo, another solution could be using package distr: library(distr) A - c(18,18,18,19,20,21,22,23,24,25,26,27,28) DA - DiscreteDistribution(A) # maybe # support(DA) # plot (DA) B - c(82,83,84,85,85,86,87,88,89,90,91,91,92) DB - DiscreteDistribution(B) #

Re: [R] probability from different values

Hello Ricardo, another solution could be using package distr: library(distr) A - c(18,18,18,19,20,21,22,23,24,25,26,27,28) DA - DiscreteDistribution(A) # maybe # support(DA) # plot (DA) B - c(82,83,84,85,85,86,87,88,89,90,91,91,92) DB - DiscreteDistribution(B) # support(DB) # plot(DB) DC - DB

Re: [R] Simulate an AR(1) process via distributions? (without specifying a model specification)

Dear Pedro, you might be interested in the demo StationaryRegressorDistr of package distr. library(distr) demo(StationaryRegressorDistr) hth, Matthias [EMAIL PROTECTED] wrote: Thanks Prof. Ripley. My apologies for not including the code. Below I illustrate my point using the GLD

Re: [R] skewness: generating distribution and estimating M3.

Dear Milton, package distrEx has methods to compute skewness. library(distrEx) ?skewness To generate new distributions you could use package distr. hth, Matthias Milton Cezar Ribeiro wrote: Dear all, How can I generate values which distrituions have left or rigth skewness. After that,

Re: [R] analytical solution to Sum of binominal distributed random numbers?

Hello Rainer, You could also get a very exact approximation using our package distr; e.g. library(distr) B1 - Binom(prob = 0.4, size = 20) B2 - Binom(prob = 0.2, size = 10) B3 - B1+B2 #convolution! plot(B3) hth, Matthias Rainer M. Krug schrieb: Frede Aakmann Tøgersen wrote: Perhaps