Re: [R] Three way correspondence analyses?

2016-08-08 Thread David L Carlson
way correspondence analyses? Sorry somehow the mail was buried in my spam folder and I was waiting for any reply. Now when I searched specifically then found in spam. Sorry about this. This is my data format. I have three data matrix. Samples are matched > dput(Cytok_and_ProInf) structure(list(

Re: [R] Three way correspondence analyses?

2016-08-05 Thread Suparna Mitra
Sorry somehow the mail was buried in my spam folder and I was waiting for any reply. Now when I searched specifically then found in spam. Sorry about this. This is my data format. I have three data matrix. Samples are matched > dput(Cytok_and_ProInf) structure(list(IFN._ = c(3.412082432,

Re: [R] Three way correspondence analyses?

2016-08-04 Thread Michael Friendly
You haven't supplied any data, and we can only guess which cca() function you are using (ade4::cca, ..., vegan::cca(), yacca::cca), and the term 'cca' generally refers to canonical correspondence analysis, which is not quite the same thing as 'three-way correspondence analysis'. For three-way

Re: [R] Three way correspondence analyses?

2016-08-03 Thread David L Carlson
] On Behalf Of Suparna Mitra Sent: Tuesday, August 2, 2016 2:58 PM To: R help Subject: [R] Three way correspondence analyses? Hello R experts, have some data for microbiome, metabolome and cytokine from the same sample. Now I want to do a three-way correspondence analyses. From three normalised data I

[R] Three way correspondence analyses?

2016-08-02 Thread Suparna Mitra
Hello R experts, have some data for microbiome, metabolome and cytokine from the same sample. Now I want to do a three-way correspondence analyses. From three normalised data I was trying, #Now CCA with two data it works good like: Metab.Cytok.Microb.cca <-