Re: [R] Extracting Data from SQL Server

2012-01-10 Thread Jeff Newmiller
This is OT here. However, you might want to investigate the UNIQUE keyword in the SQL Server documentation for SELECT. --- Jeff NewmillerThe . . Go Live...

Re: [R] error in Recursive

2012-01-10 Thread Berend Hasselman
arunkumar wrote Hi I need help in the recursive problem. this is my code #Generate two random Numbers minval=20 maxval=100 cutoffValue=50 optVal- function(cutoffValue,minval,maxval) { x=runif(2) x=x*cutoffValue for( i in 1:2) { if(x[i] 30 || x[i] 60)

Re: [R] Unexpected results using the oneway_test in the coin package

2012-01-10 Thread Mark Difford
On Jan 09, 2012 at 11:48am Christoph Liedtke wrote: I should be detecting some non-significance between groups I and III at least, but the test comes back with extremely low p-values. Where am I going wrong? Nowhere, I think. This does seem to be an error in coin. You should send your

Re: [R] Extracting Data from SQL Server

2012-01-10 Thread Ajay Askoolum
try: SELECT a.UNIQUE_ID,    a.diag01   from LoadPUS a left join CVD_ICD10 b on a.diag01 = b.[ICD-10 Codes]    or a.diag02 = b.[ICD-10 Codes]    or a.diag03 = b.[ICD-10 Codes] I am not sure why your table name CVD_ICD10 has a suffix $. From: Jeff

Re: [R] [R-sig-Geo] Spatial data, rpoispp, using window with fixed radius?

2012-01-10 Thread Mathieu Rajerison
Hi Adrian, I can not see any reference about scanmeasure and deviation functions in the current spatstat manual: are these included in the newest version of spatstat? Mathieu 2012/1/9 adrian.badde...@csiro.au The following message appeared on R-help but this discussion should be moved to

[R] tau + h 1: error in summary.rq

2012-01-10 Thread Julia Lira
Dear all, I am doing a simulation for my model that works when I use only the rq() command. However, since I need to use the varcov matrix for my Wald test, I need to compute summary(rq(), cov=TRUE). But the simulation does not work because of the error: tau + h 1: error in summary.rq I

[R] rworldmap: xlim, ylim do not change plotting region

2012-01-10 Thread Dan Bebber
Specifying xlim or ylim in the mapCountryData function of the rworldmap library do not alter the plotting region on my system. #Using the example from rworldmap library(rworldmap) mapCountryData() #uses the sample dataset mapCountryData(ylim = c(-45,45)) #makes no difference to the plot R

[R] strange Sys.Date() side effect

2012-01-10 Thread Czerminski, Ryszard
Any ideas what is the problem with this code? N - 2; c(Sys.Date(), sprintf('N = %d', N)) [1] 2012-01-10 NA Warning message: In as.POSIXlt.Date(x) : NAs introduced by coercion Best regards, Ryszard Ryszard Czerminski AstraZeneca Pharmaceuticals LP 35 Gatehouse Drive Waltham, MA 02451 USA

[R] problem installing packages

2012-01-10 Thread natalia norden
Hello, I was using version 2.13.2 and I have just downloaded the latest version 2.14.1. However, I'm trying to install the packages I was using and when I look for them in the packages list, I can´t find many in the CRAN binaries (e.g. vegan). I do find them in the CRAN sources but the

[R] Propensity score matching in R using Classification tree method

2012-01-10 Thread ardsiiitmg
I can able to calculate the propensity score using classification tree method. And if i am trying to find the PS matching i am getting error.(Error in Match(Y = Y, Tr = Tr, X = ps0) : length(Y) != length(Tr)) Propensity score matching: library(rgenoud) library(Matching) data(Passport)

Re: [R] Propensity score matching in R using Classification tree method

2012-01-10 Thread Frank Harrell
A single tree will undermatch subjects. Frank ardsiiitmg wrote I can able to calculate the propensity score using classification tree method. And if i am trying to find the PS matching i am getting error.(Error in Match(Y = Y, Tr = Tr, X = ps0) : length(Y) != length(Tr)) Propensity score

Re: [R] problem installing packages

2012-01-10 Thread Gavin Blackburn
The packages you require might not have been updated yet. You could contact the package admin. Gavin. -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of natalia norden Sent: 10 January 2012 13:35 To: r-help@r-project.org Subject:

Re: [R] strange Sys.Date() side effect

2012-01-10 Thread Duncan Murdoch
On 12-01-10 8:04 AM, Czerminski, Ryszard wrote: Any ideas what is the problem with this code? N- 2; c(Sys.Date(), sprintf('N = %d', N)) [1] 2012-01-10 NA Warning message: In as.POSIXlt.Date(x) : NAs introduced by coercion You are trying to create a vector combining a Date object and a

[R] Lapack routine dgesv: system is exactly singular

2012-01-10 Thread Terry Therneau
I was sent a copy of the data on request. A quick look shows that range(days.alive[censored==0]) [1]0 1825 range(days.alive[censored==1]) [1] 1826 1826 The original call of survdiff(Surv(days.alive, censored) ~ group) will assume that censored=1 corresponds to deaths and 0 to alive;

Re: [R] problem installing packages

2012-01-10 Thread David Winsemius
On Jan 10, 2012, at 8:45 AM, Gavin Blackburn wrote: The packages you require might not have been updated yet. You could contact the package admin. That would not be the first option. Checking to see if your mirror is deficient by looking at another mirror would be the first option. You

[R] colored outliers

2012-01-10 Thread Geophagus
Hi @ all, I have question how to mark significant outliers in R. This is my very simple script to plot a regression: TOC_NI-read.csv2(C:/Users/XYZ/Desktop/Master/Daten/Statistik/TOC-NI.csv, sep=;, dec=,, encoding=UTF-8) plot(NI~TOC,data=TOC_NI,col=blue, pch=16, xlim=c(0,450))

[R] rjags installation trouble

2012-01-10 Thread Ben Bolker
Trying to install latest rjags (3-5) from CRAN with JAGS 3.2.0 installed on Ubuntu 10.04, with r-devel ... the bottom line is that it fails while loading with /libs/rjags.so: undefined symbol: _ZN7Console15checkAdaptationERb Has anyone else seen this or is it a glitch somewhere in my

Re: [R] colored outliers

2012-01-10 Thread Justin Haynes
# find top 4 points circ - TOC_NI[order(TOC_NI$NI,decreasing=T),][1:4,]TOC_NI[order(TOC_NI$NI,decreasing=T),][1:4,] # add them to your plot! plot(NI~TOC,data=TOC_NI,col=blue, pch=16, xlim=c(0,450)) abline(lm(NI~TOC,data=TOC_NI),col = red,lwd=3)

[R] Error message in vegan ordistep

2012-01-10 Thread Nevil Amos
I am getting the following erro rmessage in ordistep. I have a number of similarly structured datasets using ordistep in a loop, and the message only occurs for some of the datasets. I cannot include a reproducible sample - the specific datasets where this is occur ing are fairly large and

[R] Sum of a couple of variables of which a few have NA values

2012-01-10 Thread Petra Opic
Dear everyone, I have looked all over the internet but I cannot find a way to solve my problem. In my data I want to sum a couple of variables. Some of these variables have NA values, and when I add them together, the result is NA dat - data.frame( id = gl(5,1), var1 = rnorm(5, 10), var2 =

[R] question about R 2.15.0

2012-01-10 Thread Wang, Jing
Dear Sir/Madam, I want to download R development version 2.15.0 source code. But I just found the version for windows and MacOS. So would you please give me some instruction about how can I download the R 2.15.0 source code? Thank you very much for you help! Best, Jing Wang

[R] Problem with segmented

2012-01-10 Thread Filoche
Hi everyone. I'm trying to use the segmented function with the following data: For instance, I use segmented package as follow: myreg2 = lm(xy$y ~ xy$x) mysegmented = segmented(myreg2, seg.Z=~x, psi=c(245000), control = seg.control(display=FALSE)) Which get me to the following error : As a

Re: [R] glmmPQL and predict

2012-01-10 Thread Ben Bolker
Mike Harwood harwood262 at gmail.com writes: Is the labeling/naming of levels in the documentation for the predict.glmmPQL function backwards? The documentation states Level values increase from outermost to innermost grouping, with level zero corresponding to the population predictions.

[R] Fwd: Sum of a couple of variables of which a few have NA values

2012-01-10 Thread Ivan Calandra
Hi Petra, Try this: dat$sums - rowSums(dat[3:5], na.rm=TRUE) I think this should do what you're looking for HTH, Ivan Message original Sujet: [R] Sum of a couple of variables of which a few have NA values Date : Tue, 10 Jan 2012 17:25:21 +0100 De :Petra Opic

Re: [R] Sum of a couple of variables of which a few have NA values

2012-01-10 Thread David Winsemius
On Jan 10, 2012, at 11:25 AM, Petra Opic wrote: Dear everyone, I have looked all over the internet but I cannot find a way to solve my problem. ? rowSums # has an na.rm argument In my data I want to sum a couple of variables. Some of these variables have NA values, and when I add

Re: [R] question about R 2.15.0

2012-01-10 Thread Duncan Murdoch
On 10/01/2012 11:31 AM, Wang, Jing wrote: Dear Sir/Madam, I want to download R development version 2.15.0 source code. But I just found the version for windows and MacOS. So would you please give me some instruction about how can I download the R 2.15.0 source code? Thank you very much for

Re: [R] colored outliers

2012-01-10 Thread Geophagus
Hi Justin, thanks a lot for your quick answer. If I use your code, all points become red. How do you include the sorted and separated four values into the points argument? The variable in your script is called circ but this is not fronted up anymore. Here the script again:

Re: [R] Sum of a couple of variables of which a few have NA values

2012-01-10 Thread Filoche
x = runif(10) x[4] = NA sum(x, na.rm = T) -- View this message in context: http://r.789695.n4.nabble.com/Sum-of-a-couple-of-variables-of-which-a-few-have-NA-values-tp4282448p4282483.html Sent from the R help mailing list archive at Nabble.com. __

Re: [R] runif with condition

2012-01-10 Thread AlanM
I have to disagree with what's been posted, but I think some very interesting points have been addressed. I'd like to add my two cents. Consider the pair {X, 1-X} where X is sampled from a uniform(0,1) distribution. The quantity 1- X also comes from a uniform(0,1) distribution and therefore

[R] Online 'Beginner's Guide to R' course (with video)

2012-01-10 Thread Highland Statistics Ltd
Apologies for cross-posting We would like to announce an on-line 'Beginner's Guide to R' course With video presentations of theory and solutions For details: http://www.highstat.com/statscourse.htm Kind regards, Alain Zuur __

[R] Adding Institution-Affiliation to Description File of R Package

2012-01-10 Thread Ben Ganzfried
Hi, I'm just finishing up an R package and I was wondering if anyone knows how to include institution name in the Description File. That is, my current Description File looks like: Package: curatedCancerData Type: Package Title: Cancer Gene Expression Analysis Version: 1.0 Date: 2011-12-24

Re: [R] colored outliers

2012-01-10 Thread Justin Haynes
woops! see inline. Hope that helps, and enjoy R. Justin On Tue, Jan 10, 2012 at 8:40 AM, Geophagus falk.hilli...@twain-systems.comwrote: Hi Justin, thanks a lot for your quick answer. If I use your code, all points become red. How do you include the sorted and separated four values into

Re: [R] Adding Institution-Affiliation to Description File of R Package

2012-01-10 Thread Duncan Murdoch
On 10/01/2012 1:02 PM, Ben Ganzfried wrote: Hi, I'm just finishing up an R package and I was wondering if anyone knows how to include institution name in the Description File. That is, my current Description File looks like: Package: curatedCancerData Type: Package Title: Cancer Gene

[R] 2 sample wilcox.test != kruskal.test

2012-01-10 Thread syrvn
Hello, I think I am right in saying that a 2 sample wilcox.test is equal to a 2 sample kruskal.test and a 2 sample t.test is equal to a 2 sample anova. This is also stated in the ?kruskal.test man page: The Wilcoxon rank sum test (wilcox.test) as the special case for two samples; lm together

Re: [R] problem installing packages

2012-01-10 Thread Uwe Ligges
On 10.01.2012 14:35, natalia norden wrote: Hello, I was using version 2.13.2 and I have just downloaded the latest version 2.14.1. However, I'm trying to install the packages I was using and when I look for them in the packages list, I can´t find many in the CRAN binaries (e.g. vegan). I do

Re: [R] 2 sample wilcox.test != kruskal.test

2012-01-10 Thread Łukasz Ręcławowicz
2012/1/10 syrvn ment...@gmx.net And why does kruskal.test(x~y) differ from kruskal.test(f~d)?? Your formula is wrong, but function doesn't see errors. formula a formula of the form lhs ~ rhs where lhs gives the data values and rhs the corresponding groups. And that leads to

Re: [R] Calculating rolling mean by group

2012-01-10 Thread Sam Albers
Thanks for getting me on the right path Gabor! I have one outstanding issue though. On Mon, Jan 9, 2012 at 4:21 PM, Gabor Grothendieck ggrothendi...@gmail.com wrote: On Mon, Jan 9, 2012 at 6:39 PM, Sam Albers tonightstheni...@gmail.com wrote: Hello all, I am trying to determine how to

[R] Converting BY to a data.frame

2012-01-10 Thread Ramiro Barrantes
Hello, I am trying to convert BY to a data frame, consider the following example: exampleDF-data.frame(a=c(1,2),b=c(10,20),name=c(first,second)) exampleBY-by(exampleDF,with(exampleDF,paste(a,b,sep=_)),   function(x) {     data.frame(    

Re: [R] Error when using foreach package for parralelization

2012-01-10 Thread Mikko Korpela
On 01/03/2012 03:19 PM, Julien Textoris wrote: I'm trying to parallelize the following R code : pk2test = c(1:16,(12*16+1):(12*16+16),(16*16+1):(16*16+16),(20*16+1):(20*16+16)) score.mat = matrix(nc=16*4,nr=16*4) for(i in 1:(16*4)) { for(j in i:(16*4)) {

[R] rpart vs. tree and deviance calculations

2012-01-10 Thread Josh Browning
Hi Everyone, I'm working on building some classification trees, and up to this point I've been using rpart. However, I recently discovered the tree package, and found that it had some useful functions (in particular deviance(), which I would really like to use for my project). I can't seem

Re: [R] Fwd: Sum of a couple of variables of which a few have NA values

2012-01-10 Thread PetraOpic
Dear Ivan, Thank you very much for your help. How do I use rowSums if I need to skip a variable from summing? (example: sum var1, var2, var3, var5, var34 only). Thanks in advance, Petra Opic -- View this message in context:

[R] Restricting R session

2012-01-10 Thread Antonio Rodriges
Hello, Is it possible to use R on public server where each user has its own restricted R session? In particular, how to prohibit some set of functions, for example, from base package? How to limit session operating memory and CPU time? What additional security considerations must be taken care

[R] grplasso

2012-01-10 Thread Scott Raynaud
I want to use the grplasso package on a data set where I want to fit a linear model.  My interest is in identifying significant beta coefficients.  The documentation is a bit cryptic so I'd appreciate some help.   I know this is a strategy for large numbers of variables but consider a simple

Re: [R] glmmPQL and predict

2012-01-10 Thread Prof Brian Ripley
The whole of idea of 'level' in mixed models is confusing to some. Professor Snijders (who teaches our students) and Professor Bates label from opposite ends. But, assuming this is my work in package MASS (Master Harwood: it is childish, to put it mildly, to fail to give due credit), it

[R] plotOHLC(alpha3): Error in plotOHLC(alpha3) : x is not a open/high/low/close time series

2012-01-10 Thread Ted Byers
R version 2.12.0, 64 bit on Windows. Here is a short script that illustrates the problem: library(tseries) library(xts) setwd('C:\\cygwin\\home\\Ted\\New.Task\\NKs-01-08-12\\NKs\\tests') x = read.table(quotes_h.2.dat, header = FALSE, sep=\t, skip=0) str(x) y -

Re: [R] Converting BY to a data.frame

2012-01-10 Thread David Winsemius
On Jan 10, 2012, at 1:36 PM, Ramiro Barrantes wrote: Hello, I am trying to convert BY to a data frame, consider the following example: exampleDF-data.frame(a=c(1,2),b=c(10,20),name=c(first,second)) exampleBY-by(exampleDF,with(exampleDF,paste(a,b,sep=_)), function(x) {

Re: [R] problem installing packages

2012-01-10 Thread natalia norden
Thank you very much for your answers. I could do it by downloading the package I needed manually and then installing it through the Terminal. Yet the fundamental problem remains. I downloaded R 2.14.1 several times from different mirrors and there are many packages that do not show up in the list

Re: [R] problem installing packages

2012-01-10 Thread R. Michael Weylandt michael.weyla...@gmail.com
What lists are you referring to when you state: there are many packages that do not show up in the list of binaries. They do in the list of sources? CRAN? To see all packages installed on your machine try rownames(installed.packages(()) I think available.packages() will give packages

[R] How to make this for() loop memory efficient?

2012-01-10 Thread iliketurtles
##I have 2 columns of data. The first column is unique event IDs that represent a phone call made to a customer. ###So, if you see 3 entries together in the first column like follows: matrix(c(call1a,call1a,call1a) ) ##then this means that this particular phone call (the first call that's

[R] different results from fligner.test

2012-01-10 Thread gaiarrido
I've made fligner test with the same data, changing the orders of the variables, and this what i get fligner.test(rojos~edadysexo*zona*ano*estacion) Fligner-Killeen test of homogeneity of variances data: rojos by edadysexo by zona by ano by estacion Fligner-Killeen:med chi-squared =

[R] Can prototype and initialize coexist?

2012-01-10 Thread Keith Weintraub
Folks, My object oriented background is in Java and C++. I am a novice to using S4/object-oriented coding in R but not to R. Below is an example that I found that I have expanded on. I am not getting how prototype and initialize work together, if at all. Here is output from a short session

[R] help

2012-01-10 Thread Anna Olofsson
Hi, I'm pretty new at programming and with the R language. I'm just trying to get familiar with R and wrote a script in gedit (should I use emacs instead?), x - [10.4 5.6 3.1 6.4 21.7] y - [12,5.6, 7.2, 1.0, 9.3] plot(x,y) then I went to the command window in the terminal (I'm using unix) to

[R] Correlograms

2012-01-10 Thread Natbyah
I would like to make a correlogram in which I also have a correlation matrix instead of one of the panels. Is that possible? -- View this message in context: http://r.789695.n4.nabble.com/Correlograms-tp4283245p4283245.html Sent from the R help mailing list archive at Nabble.com.

Re: [R] help

2012-01-10 Thread Sarah Goslee
There might be an x in your R session, but not from that script. Try it by pasting those three lines at the command line: x - [10.4 5.6 3.1 6.4 21.7] Error: unexpected '[' in x - [ y - [12,5.6, 7.2, 1.0, 9.3] Error: unexpected '[' in y - [ plot(x,y) Error in plot(x, y) : object 'x' not

Re: [R] help

2012-01-10 Thread Peter Alspach
Tena koe Anna [ is for subsetting, you need c(): x - c(10.4, 5.6, 3.1, 6.4, 21.7) y - c(12, 5.6, 7.2, 1.0, 9.3) plot(x, y) HTH Peter Alspach -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On Behalf Of Anna Olofsson Sent: Wednesday, 11

Re: [R] Correlograms

2012-01-10 Thread Kevin Wright
If I understand your question correctly, install the corrgram package from CRAN. Then, library(corrgram) cm - cor(iris[ , 1:4]) corrgram(cm, type=corr) Also, see help for the vote data: ?vote Kevin Wright On Tue, Jan 10, 2012 at 2:06 PM, Natbyah nathanie...@gmail.com wrote: I would like to

Re: [R] different results from fligner.test

2012-01-10 Thread peter dalgaard
On Jan 10, 2012, at 21:30 , gaiarrido wrote: I've made fligner test with the same data, changing the orders of the variables, and this what i get fligner.test(rojos~edadysexo*zona*ano*estacion) Fligner-Killeen test of homogeneity of variances data: rojos by edadysexo by zona

Re: [R] Aggregate by minimum

2012-01-10 Thread Hadley Wickham
On Mon, Jan 9, 2012 at 8:00 PM, jim holtman jholt...@gmail.com wrote: try this: x - structure(list(speed = c(3,9,14,8,7,6), result = c(0.697, 0.011, 0.015, 0.012, 0.018, 0.019), house = c(1, + 1, 1, 1, 1, 1), date = c(719, 1027, 1027, 1027, 1030, 1030), +    id = c(1000, 1, +    10001,

[R] short-hand to avoid use of length() in subsetting vectors?

2012-01-10 Thread Eric Rupley
Hi-- I suspect this is a frequently considered (and possibly asked) question, but I haven't thus far found an answer: For slicing a vector with x[…], is there a symbol for length(x)? I'm seeking a short-hand for referring to the length of vector one is trying to index. E.g., for a

Re: [R] Can prototype and initialize coexist?

2012-01-10 Thread Martin Morgan
On 01/10/2012 11:47 AM, Keith Weintraub wrote: Folks, My object oriented background is in Java and C++. I am a novice to using S4/object-oriented coding in R but not to R. Below is an example that I found that I have expanded on. I am not getting how prototype and initialize work together,

Re: [R] short-hand to avoid use of length() in subsetting vectors?

2012-01-10 Thread Steve Lianoglou
Hi, On Tue, Jan 10, 2012 at 6:04 PM, Eric Rupley erup...@umich.edu wrote: Hi-- I suspect this is a frequently considered (and possibly asked) question, but I haven't thus far found an answer:        For slicing a vector with x[…], is there a symbol for length(x)? I'm seeking a

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Ray Brownrigg
On Wed, 11 Jan 2012, iliketurtles wrote: ##I have 2 columns of data. The first column is unique event IDs that represent a phone call made to a customer. ###So, if you see 3 entries together in the first column like follows: matrix(c(call1a,call1a,call1a) ) ##then this means that this

Re: [R] short-hand to avoid use of length() in subsetting vectors?

2012-01-10 Thread Nordlund, Dan (DSHS/RDA)
-Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of Steve Lianoglou Sent: Tuesday, January 10, 2012 3:28 PM To: Eric Rupley Cc: r-help@r-project.org Subject: Re: [R] short-hand to avoid use of length() in subsetting vectors?

[R] Rpad.org down? Searching latest R-Reference card

2012-01-10 Thread Jonas Stein
Hi, i'd like to update my R-Reference card and commit some edits, but i could not get the source from rpad.org Did it move? kind regards, -- Jonas Stein n...@jonasstein.de __ R-help@r-project.org mailing list

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Steve Lianoglou
I'm having a really difficult time understanding what you're trying to get -- copy and pasting your code is failing to run, and your question isn't clear, ie: For each phone call that BEGINS with the module which is denoted by 81 (i.e. of the form 81X,XXX), what is the expected number of modules

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Ray Brownrigg
On Wed, 11 Jan 2012, Ray Brownrigg wrote: On Wed, 11 Jan 2012, iliketurtles wrote: ##I have 2 columns of data. The first column is unique event IDs that represent a phone call made to a customer. ###So, if you see 3 entries together in the first column like follows:

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Ray Brownrigg
Steve: I don't understand why you couldn't get the original code working. You just have to notice that one comment overflows its line. However I couldn't get your code to match the output of the original - almost, but not quite! Ray On Wed, 11 Jan 2012, Steve Lianoglou wrote: I'm having

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Steve Lianoglou
Let me just reply to myself. Sorry, it's funny how much I don't get this, but it appears Ray is following you and provides an answer -- scratch my email, it seems to be way off (you should still learn plyr and/or data.table if you haven't yet, tho ;-) Apologies, -steve On Tue, Jan 10, 2012 at

Re: [R] How to make this for() loop memory efficient?

2012-01-10 Thread Steve Lianoglou
Yeah -- just fired off an apology email before this landed in my inbox. Sometimes I'm better off not trying to help at all -- this was one of those cases ;-) Whatever I was trying to do clearly was going down the wrong trail Thankfully, you're on top of it though. Sorry for the spam, -steve

[R] Vegan(ordistep) error: Error in if (aod[1, 5] = Pin) { : missing value where TRUE/FALSE needed

2012-01-10 Thread Nevil Amos
I am getting the following erro rmessage in ordistep. I have a number of similarly structured datasets using ordistep in a loop, and the message only occurs for some of the datasets. I cannot include a reproducible sample - the specific datasets where this is occur ing are fairly large and

Re: [R] runif with condition

2012-01-10 Thread Carl Witthoft
AlanM said, Consider the pair {X, 1-X} where X is sampled from a uniform(0,1) distribution. The quantity 1- X also comes from a uniform(0,1) distribution and therefore is probabilistic and not deterministic. The sum of independent random variables is itself a random variable. If X1, X2 X3

Re: [R] short-hand to avoid use of length() in subsetting vectors?

2012-01-10 Thread Duncan Murdoch
On 12-01-10 6:04 PM, Eric Rupley wrote: Hi-- I suspect this is a frequently considered (and possibly asked) question, but I haven't thus far found an answer: For slicing a vector with x[…], is there a symbol for length(x)? No, there isn't. You don't need it much, but if you do

Re: [R] different results from fligner.test

2012-01-10 Thread gaiarrido
Yeah! it works, i know it because of the degrees of freedom. This is what i get now g - interaction(ano, edadysexo, zona, estacion) fligner.test(rojos ~ g) Fligner-Killeen test of homogeneity of variances data: rojos by g Fligner-Killeen:med chi-squared = 249.7591, df = 87,

[R] 64bit R under 32bit winxp

2012-01-10 Thread 孟欣
Hi all: My OS is 32bit winxp,but I wanna install 64bit R2.14.1. From the following website,it says You can also go back and add 64-bit components to a 32-bit install, or vice versa

[R] Problems with constrOptim

2012-01-10 Thread cianders
I am having problems with the constrOptim problem. I am trying to compute a function which must be concave. When I put the linear constraints in, constrOptim always returns the original values of the parameter entered after several iterations. However, if I set ui to the 0 matrix, it will optimize

Re: [R] help

2012-01-10 Thread Anna Olofsson
Thank you! The c was missing. I don't know if it's ok to continue on this thread, but I also had another question about reading data. I have this file containing 3 columns and 19 rows. 0 0.960.21 0 0.450.4 0 0.870.1 0 0.560.04 0 0.570.04 0

Re: [R] help

2012-01-10 Thread R. Michael Weylandt michael.weyla...@gmail.com
That sort of name is allowed but not advised because it can lead to confusion in certain non-standard evaluation functions like subset(). If you really want the name like that add the check.names = FALSE argument to read.table() Michael Weylandt On Jan 10, 2012, at 5:57 PM, Anna Olofsson

[R] try() with silent=TRUE not preventing printing of error message

2012-01-10 Thread Benjamin Tyner
Hello, We're curious to know why, on builds lacking Tcl/Tk, try(library(tcltk),silent=TRUE) still allows the message to be printed: Error in firstlib(which.lib.loc, package) : Tcl/Tk support is not available on this system though it does succeed in trapping the error condition?

[R] Finding percentile of a value from an empirical distribution

2012-01-10 Thread Robert A'gata
Hello, I am not sure how to do this in R. Any suggestion would be appreciated. I have a vector of values from where I build an empirical CDF. For example: x - seq(1,100) x - sample(x,1000,replace=T) quantile(x,probs=seq(0,1,.05)) 0% 5%10%15%20%25%30%35%40%

Re: [R] Finding percentile of a value from an empirical distribution

2012-01-10 Thread R. Michael Weylandt michael.weyla...@gmail.com
Look at ?ecdf Michael On Jan 10, 2012, at 11:52 PM, Robert A'gata rhelp...@gmail.com wrote: Hello, I am not sure how to do this in R. Any suggestion would be appreciated. I have a vector of values from where I build an empirical CDF. For example: x - seq(1,100) x -

Re: [R] Finding percentile of a value from an empirical distribution

2012-01-10 Thread Jorge I Velez
Hi Robert, Try set.seed(123) x - seq(100) x - sample(x, 1000, replace = TRUE) f - ecdf(x) f(10) # [1] 0.099 f(71) # [1] 0.716 See ?ecdf for more information. HTH, Jorge.- On Tue, Jan 10, 2012 at 11:52 PM, Robert A'gata wrote: Hello, I am not sure how to do this in R. Any suggestion

Re: [R] Finding percentile of a value from an empirical distribution

2012-01-10 Thread Robert A'gata
Thank you. That's easier than I thought. On Wed, Jan 11, 2012 at 12:06 AM, Jorge I Velez jorgeivanve...@gmail.com wrote: Hi Robert, Try set.seed(123) x - seq(100) x - sample(x, 1000, replace = TRUE) f - ecdf(x) f(10) # [1] 0.099 f(71) # [1] 0.716 See ?ecdf for more information.

Re: [R] Extracting Data from SQL Server

2012-01-10 Thread dthomas
Thanks for you help guys, your suggestion Ajay worked fine, cheers Dyfed Thomas Population Health Analyst DDI: 07 858 5967 Mob: 021 409 800 Midlands Health Network WEL House 711 Victoria Street PO Box 983 Hamilton 3240 Phone: 07 839 2888 Fax: 07 834 9242 From: Ajay Askoolum [via R]