[R] [R-pkgs] Package "Rogue": Detect wildcard taxa in sets of phylogenetic trees

Dear R users, Package "Rogue" has been published on CRAN: https://CRAN.R-project.org/package=Rogue. "Rogue" improves phylogenetic analysis by detecting wildcard taxa whose inconsistent position reduces split support and resolution in consensus trees. It implements an effective new

Re: [R] How to create density ellipses with R

Dear Chris, I took a quick look at your document. You might be interested in Friendly, Monette, and Fox, Elliptical Insights: Understanding Statistical Methods through Elliptical Geometry, Statistical Science 2013, 28: 1–39, which is available at . I

Re: [R] How to create density ellipses with R

This spurred me on to clarify my own understanding of these ellipses (and of ellipsoid hulls) and led to: https://www.psyctc.org/Rblog/posts/2022-01-15-data-ellipses-and-confidence-ellipses/ And I am, decidedly nervously, putting it here in case it's useful to you Paul or to anyone else. I

Re: [R] How to create density ellipses with R

ellipse draws mathematical ellipses, I believe For proper bivariate normal density ellipses (not simply contours), check out: car::dataEllipse heplots::covEllipses -Michael Message: 1 Date: Fri, 14 Jan 2022 10:12:50 -0500 From: Paul Bernal To: R Subject: [R] How to create density ellipses