Derek Ogle DOgle at northland.edu writes:
I am attempting to create a plot with intervals stretched in the
x-direction using plotCI() in the plotrix package. The same data
provides an appropriate set of intervals when stretched in the
y-direction but I only get a lower interval when
Hi R-users,
I have a set of data from 1958-2009, how do I extract the data from 1927 and
2007?
beechworth.dt
Year Month Rain
1 1858 3 21.8
2 1858 4 47.0
3 1858 5 70.1
4 1858 6 78.7
5 1858 7 101.6
6 1858 8 129.8
7 1858 9 80.8
8
Roslina Zakaria wrote:
Hi R-users,
I have a set of data from 1958-2009, how do I extract the data from 1927 and
2007?
beechworth.dt
Year Month Rain
11858 3 21.8
21858 4 47.0
31858 5 70.1
41858 6 78.7
51858 7 101.6
61858 8 129.8
7
If Year is numeric data, then you can use:
beechworth.dt.2 - subset(beechworth.dt, Year=1997 Year =2008)
If it is character, then you can use:
beechworth.dt.2 - subset(beechworth.dt, Year %in% as.character(1997:2008))
2009/4/20 Roslina Zakaria zrosl...@yahoo.com:
Hi R-users,
I have a set of
Hi,
Try this one:
beechworth.dt.2 - beechworth.dt[beechworth.dt$Year=1927
beechworth.dt$Year=2007,]
Martins
On Apr 20, 9:59 am, Roslina Zakaria zrosl...@yahoo.com wrote:
Hi R-users,
I have a set of data from 1958-2009, how do I extract the data from 1927 and
2007?
beechworth.dt
Hi,
maybe the following line works for you:
beechworth.dt.2 - beechworth.dt[as.numeric(beechworth.dt$Year) %in% 1927:2007,
]
(using as.numeric() to make sure that Year is numeric, maybe not needed?).
Christian
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
On Sun, 19 Apr 2009 23:59:43 -0700 (PDT) Roslina Zakaria
zrosl...@yahoo.com wrote:
RZ I have a set of data from 1958-2009, how do I extract the data from
RZ 1927 and 2007?
RZ beechworth.dt
RZ Year Month Rain
how about:
beech.cut-subset(beechworth.dt,(Year1926Year2008))
hth
Stefan
Hi
jimdare wrote:
Hello,
When I use savePlot(filename=xy,type=eps) or
savePlot(filename=xy,type=wmf) , I get the following error:
Error in grid.Call(L_textBounds, as.graphicsAnnot(x$label), x$x, x$y, :
Polygon edge not found (zero-width or zero-height?)
This doesn't occur when I
Giuseppe,
Please enter a meaningfull subject line.
Have you tried the examples from the variogram helpfile? They clearly
demonstrate how to do it. If you still have problems, then you need to
give us a reproducible example of your dataset and code.
HTH,
Thierry
Dieter Menne wrote:
Hi, Jim,
there is a typo at the bottom of plotCI: there is an y.to.in which should be
x.to.in.
See list for an example.
http://article.gmane.org/gmane.comp.lang.r.general/147103
Should be:
nz - (abs(ui - pmin(x + gap, ui)) * x.to.in) 0.001
Dieter
Hi Dieter,
Hi
I found that variogram is a function in spatial library. I tried
??variogram
library(spatial)
?variogram
I used an example and I did not have any problem with it.
data(topo, package=MASS)
topo.kr - surf.ls(2, topo)
variogram(topo.kr, 25)
I do not have gstat available but from
Roslina Zakaria wrote:
Hi R-users,
I just change to the new version of R. I just wonder why everytime I run my
function I will get this message:
source(.trPaths[4], echo=TRUE, max.deparse.length=1)
Thank you.
Hi Roslina,
If your function consists of the line:
This is my result:
class(data)
[1] data.frame
str(data)
'data.frame': 2193 obs. of 83 variables:
$ X.ID. : Factor w/ 2193 levels '18201',..:
1 2 3 4 5 6 7 8 9 10 ...
$ X.kod. : Factor w/ 20 levels '01','02',..: 1 1
1 1 1 1 1 1 1 1 ...
Hi R-users,
I just change to the new version of R. I just wonder why everytime I run my
function I will get this message:
source(.trPaths[4], echo=TRUE, max.deparse.length=1)
Thank you.
__
R-help@r-project.org mailing list
Christophe Genolini cgenolin at u-paris10.fr writes:
...
Thanks for your answer. I finally succeed.
I used the listings package to define an environment that put code in a
grey box. The command is \lstnewenvironment{Sinput}[1][]{
...
This is too nice code to be lost, but it suffers from
This is the first release of the xterm256 package.
xterm256 is a small package that takes advantage of the 256 color mode
of xterm, enabling use of foreground and background colors in the R
console. The package exposes one function style that takes three
arguments:
- (x) the text to style
-
jjh21 wrote:
Hello,
The journal I am publishing in requires MS Word files. What is my best
option for getting a high quality image of a graph done in R into Word?
JPEG? Postscript?
Windows metafile, if you are under Windows anyway.
Uwe Ligges
Thanks.
Hello,
The journal I am publishing in requires MS Word files. What is my best
option for getting a high quality image of a graph done in R into Word?
JPEG? Postscript?
Thanks.
--
View this message in context:
See ade4 or mva package.
Justin BEM
BP 1917 Yaoundé
De : nikolay12 nikola...@gmail.com
À : r-help@r-project.org
Envoyé le : Lundi, 20 Avril 2009, 4h37mn 41s
Objet : [R] PCA and automatic determination of the number of components
Hi all,
I have relatively
I actually get superior results from creating a pdf, opening it in adobe
acrobat, adjust the image size so it is big as possible with the screen,
then copying it into word (by using the little square capture icon).
HTH, Simon.
- Original Message -
From: jjh21 jjhar...@gmail.com
To:
You can also use parallel analysis using the scree.plot function of the
psy package.
Regards,
Bruno
Bruno Falissard
INSERM U669, PSIGIAM
Paris Sud Innovation Group in Adolescent Mental Health
Maison de Solenn
97
On Mon, 20 Apr 2009 03:01:42 -0700 (PDT) jjh21 jjhar...@gmail.com
wrote:
J The journal I am publishing in requires MS Word files. What is my
J best option for getting a high quality image of a graph done in R
J into Word? JPEG? Postscript?
I use png or eps. The latter has the better output but
Use wmf format. That's a vector format rather than bitmapped
so it will give better quality. Also you will be able to edit the
image right in Word, e.g. change axis labels.
On Mon, Apr 20, 2009 at 6:01 AM, jjh21 jjhar...@gmail.com wrote:
Hello,
The journal I am publishing in requires MS
I've been working with a rather large data set (~10M rows), and while biglm
works beautifully for generating coefficients, it does not report an r-squared.
It does report RSS. Any idea on how one could coax an R-squared out of biglm?
Thanks in advance for any help with this!
Bryan Lim
Good morning to all,
I should find the zero of a specific function with
respect to a vector of arguments.
Does it exist something similar in R?
Thank
you very much,
Enrico Foscolo
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R-help@r-project.org mailing list
Word can be memory hungry when using graphics.
Another alternative is the metafile which is very compact and can give good
results
eg from the example
win.metafile(Rplot%02d.wmf, pointsize = 10)
Regards
Duncan Mackay
Department of Agronomy Soil Science
University of New England
ARMIDALE NSW
On Apr 20, 2009, at 4:33 AM, Grześ wrote:
This is my result:
class(data)
[1] data.frame
str(data)
'data.frame': 2193 obs. of 83 variables:
$ X.ID. : Factor w/ 2193 levels
'18201',..:
1 2 3 4 5 6 7 8 9 10 ...
$ X.kod. : Factor w/
Jim and Dieter,
Thank you for the quick reply and precise fix. My plot now works as
expected. Thanks again.
-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-
project.org] On Behalf Of Jim Lemon
Sent: Monday, April 20, 2009 4:21 AM
To:
justin bem justin_bem at yahoo.fr writes:
See ade4 or mva package.
Justin BEM
BP 1917 Yaoundé
I guess the problem was not to find PCA (which is easy to find), but
finding an automatic method of selecting (determining sounds like
that selection would be correct in some objective sense)
jjh21 wrote:
Hello,
The journal I am publishing in requires MS Word files. What is my best
option for getting a high quality image of a graph done in R into Word?
JPEG? Postscript?
Thanks.
Double check the instructions for authors. Most journals take pdf and
eps as separate files.
Frank
Did you try using:debug(f2)
and then running the function, and see what is your variables condition
before the error ?
On Sun, Apr 19, 2009 at 12:58 PM, li li hannah@gmail.com wrote:
Hi, can anyone help me with the following code? Thanks!
library(mvtnorm)
f2 - function(n, rho) {
var -
enrico.fosco...@libero.it wrote:
Good morning to all,
I should find the zero of a specific function with
respect to a vector of arguments.
Does it exist something similar in R?
Someone else may pipe up with a better answer, but this is generally
a difficult problem (see _Numerical
Hi. I have a csv file. I imported it with
mydata-read.table(C:/dataForR/radiology/WordFrequency.csv, header=TRUE,
sep=,)
dim(mydata)
[1] 982 925
The first column had the doc numbers like doc1, doc2, etc. so I did
mydataNum-mydata[,-1]
dim(mydataNum)
[1] 982 924
The second to last column
Hi,
I have an experimental data with 2 factors: visit and treatment. Each subject
has 2 visits and on each visit they get a treatment. We take samples before and
after treatment. I can easily to do the 2-way ANOVA in R with visit and
treatment as factors.
anova( lm(data ~ visit*treatment) )
Try this:
0.7-0.3==0.4
(We get FALSE)
0.7-0.30.4
(We get TRUE)
but
0.8-0.3==0.5
(TRUE)
0.8-0.30.5
(FALSE)
Funny, he?
There is a way around:
round(0.7-0.3,1)==0.4
(TRUE)
Obviously there is a problem with some combinations of decimal subtractions,
that - we have the feeling - shouldt be
Roslina Zakaria wrote:
Hi R-users,
I just change to the new version of R. I just wonder why everytime I run
my function I will get this message:
source(.trPaths[4], echo=TRUE, max.deparse.length=1)
Are you by any chance using Tinn-R? Could be a glitch in the interaction
Hello R users,
Doing My PhD I collected count data which I believe is zero inflated. I have
run a statistical model with lmer and family=poisson and got
summary(model)@sigma=1 so I believe there is no overdispertion. I would
like to use the fmr function from the 'gnlm' library but I just cannot
This is a FAQ.
Try this:
all.equal(0.7-0.3, 0.4)
On Mon, Apr 20, 2009 at 10:07 AM, wolfgang.siewert
wolfgang.siew...@gmail.com wrote:
Try this:
0.7-0.3==0.4
(We get FALSE)
0.7-0.30.4
(We get TRUE)
but
0.8-0.3==0.5
(TRUE)
0.8-0.30.5
(FALSE)
Funny, he?
There is a way around:
this is a (very) Frequently Asked Question; check:
http://cran.r-project.org/doc/FAQ/R-FAQ.html#Why-doesn_0027t-R-think-these-numbers-are-equal_003f
Best,
Dimitris
wolfgang.siewert wrote:
Try this:
0.7-0.3==0.4
(We get FALSE)
0.7-0.30.4
(We get TRUE)
but
0.8-0.3==0.5
(TRUE)
0.8-0.30.5
Ben,
That is not a good approach, i.e. finding the zero, x*, of F(x), such that
F(x*) = 0, as a minimum of ||F(x)|| is NOT a good approach. Any root of
F(x) is indeed a global minimum of ||F(x)||, or for that matter, the global
minimum of any f(F(x)), where f(.) is a mapping from R^p to R, such
Paired (aka. Repeated measures, aka. within-Ss) tests can be achieved
by using aov() and specifying the within-Ss effect in the error term:
my_aov = aov( dependent_variable~between_Ss_variable*within_Ss_variable
+ Error(Ss_id/(within_Ss_variable)))
summary(my_aov)
On Mon, Apr 20, 2009 at 10:25
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https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
ronggui wrote:
It is always unfair to complain about volunteer work, and what you
should do is to make contributions.
I only half agree with this: I think that it's fair to complain, as
long as you make contributions. With documentation, if you don't think
it's clear, as part of your
Hello,
Does anyone know about robust estimation of vector autoregressive models
(VAR(p)) in R? Or in Matlab?
Currently I am using the function ar().
The problem is, that the variances of my data change a lot with time, and we
also have some outliers in the data. That is why, I presume, that
Does the contourplot() routine have an argument analogous to the
levels argument in the contour() routine? More generally, is there a
way for the user to fix the contour levels in contourplot()? Thanks.
--Sam Cable
__
R-help@r-project.org mailing
Ravi Varadhan wrote:
That is not a good approach, i.e. finding the zero, x*, of F(x), such that
F(x*) = 0, as a minimum of ||F(x)|| is NOT a good approach. Any root of
F(x) is indeed a global minimum of ||F(x)||, or for that matter, the global
minimum of any f(F(x)), where f(.) is a mapping
On Apr 20, 2009, at 10:30 AM, Cable, Samuel B Civ USAF AFMC AFRL/RVBXI
wrote:
Does the contourplot() routine have an argument analogous to the
levels argument in the contour() routine? More generally, is
there a
way for the user to fix the contour levels in contourplot()? Thanks.
levyofi wrote:
Hello R users,
Doing My PhD I collected count data which I believe is zero inflated. I
have run a statistical model with lmer and family=poisson and got
summary(model)@sigma=1 so I believe there is no overdispertion.
You have been misled. sigma is set to 1 by
Cable, Samuel B Samuel.Cable at hanscom.af.mil writes:
Does the contourplot() routine have an argument analogous to the
levels argument in the contour() routine? More generally, is there a
way for the user to fix the contour levels in contourplot()? Thanks.
Assuming lattice:
cuts
Dieter
Uwe Ligges ligges at statistik.tu-dortmund.de writes:
The journal I am publishing in requires MS Word files. What is my best
option for getting a high quality image of a graph done in R into Word?
JPEG? Postscript?
Windows metafile, if you are under Windows anyway.
But make sure that
On Apr 20, 2009, at 11:22 AM, Dieter Menne wrote:
Cable, Samuel B Samuel.Cable at hanscom.af.mil writes:
Does the contourplot() routine have an argument analogous to the
levels argument in the contour() routine? More generally, is
there a
way for the user to fix the contour levels in
Dear Cecilia,
just adding some examples to Stefan's post, which says everything
already. I've recently gone mad with reshaping, so I assume it is a
little tricky. Or maybe what I tell you is obvious, then just skip it.
**import**
Your files are spreadsheets, so the best way to import is to save
Hi,
I've been working with R for a couple of years, and I've
been able to get most of the things done that I needed (sometimes in
a roundabout way). A few experienced statisticians told me that
R is best for interactive data analysis, but for large-scale
computations, one needs something else.
I
Hello,
I am using the VGAM library to perform a multinomial logistic regression
with 3 outcome categories and a binary independant factor.
How can I contraint the beta
[[alternative HTML version deleted]]
__
R-help@r-project.org mailing list
Hello,
I am using the VGAM library to perform a multinomial logistic regression
with 3 outcome categories and a binary independant factor.
How can I constraint the 2 beta parameters to be equal. I intend to do that
in order to obtain a Log-Likelihood to test against the model with 2
different beta
Now everything is clear for me. Thanks David! :)
David Winsemius wrote:
On Apr 20, 2009, at 4:33 AM, Grześ wrote:
This is my result:
class(data)
[1] data.frame
str(data)
'data.frame':2193 obs. of 83 variables:
$ X.ID. : Factor w/ 2193
Dear R-users,
I am trying to produce (standard and trellis) scatterplots which use the
same range of the x and y axes. In addition, I would like the plots to
be physically square. Is there one or more specific argument(s) to plot
and xyplot what would do that? I have looked at various
Sebastien Bihorel Sebastien.Bihorel at cognigencorp.com writes:
I am trying to produce (standard and trellis) scatterplots which use the
same range of the x and y axes. In addition, I would like the plots to
be physically square. Is there one or more specific argument(s) to plot
and xyplot
At 12:08 PM + 4/20/09, Jari Oksanen wrote:
justin bem justin_bem at yahoo.fr writes:
See ade4 or mva package.
Justin BEM
BP 1917 Yaoundé
I guess the problem was not to find PCA (which is easy to find), but
finding an automatic method of selecting (determining sounds like
that
Thank you very much Ben.
I took you advice and run the lmer model with family=quasipoisson and got
sigma~10. I guess this means that the data has overdispertion but not too
high (15) for me to must use zero inflated model.
Am I right?
I will also post to the r-sig-mixed-models specialty list...
On Apr 20, 2009, at 12:18 PM, Dieter Menne wrote:
Sebastien Bihorel Sebastien.Bihorel at cognigencorp.com writes:
I am trying to produce (standard and trellis) scatterplots which
use the
same range of the x and y axes. In addition, I would like the plots
to
be physically square. Is there
wolfgang.siewert wolfgang.siewert at gmail.com writes:
There is a way around:
round(0.7-0.3,1)==0.4
(TRUE)
Obviously there is a problem with some combinations of decimal subtractions,
that - we have the feeling - shouldt be solved.
Oh no, not that one again! This was lecture two in my
I am not sure that I fully understand what you want, but look at the TkListView
function in the TeachingDemos package for one possible solution. If that is
not what you meant, then a better problem description will help us to help you.
--
Gregory (Greg) L. Snow Ph.D.
Statistical Data Center
ade4 has the 'testdim' function which implements a recent method for
estimating the number of dimension for PCA on correlation matrix. Paper
describing the approach is available at
http://pbil.univ-lyon1.fr/members/dray/articles/SD805.php
William Revelle wrote:
At 12:08 PM + 4/20/09,
Is there a way to automate fitting and assessing loglinear models for
several nominal variables . . . something akin to step or drop1 or add1
for linear or logistic regression?
Thanks.
--Chris
--
Christopher W. Ryan, MD
SUNY Upstate Medical University Clinical Campus at Binghamton
40 Arch
There are functions in the caret package to do classification with pls
and spls, if that is what you mean. They are plsda and splsda.
--
Max
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https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting
On Mon, 20 Apr 2009 11:49:29 -0400 Juliet Hannah
juliet.han...@gmail.com wrote:
JH I've been working with R for a couple of years, and I've
JH been able to get most of the things done that I needed (sometimes in
JH a roundabout way). A few experienced statisticians told me that
JH R is best for
I would like to summarize. Would you please confirm that my summary is
correct? Thank you very much!
Determining R^2 in Random Forests (for a Regression Forest):
1. For each individual case, record a mean prediction on the dependent
variable y across all trees for which the case is OOB
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Thanks to all for the suggestions.
Are you aware of a convenient implementation of AIC/BIC for the problem of
selecting the number of factors?
Nick
William Revelle wrote:
At 12:08 PM + 4/20/09, Jari Oksanen wrote:
justin bem justin_bem at yahoo.fr writes:
See ade4 or mva
Hi,
I have Agilent and Illumina SNP data. That's the only thing I know about the
files - there seem to be no version specification in any of them.
Is there a generic genotype calling algorithm that I could try to use on
these datasets?
thanks,
N.
--
View this message in context:
Hi
I tried to install the sem package and it was succsessful but I keep
getting the following message
Paket 'sem' erfolgreich ausgepackt und MD5 Summen abgeglichen
Die heruntergeladenen Pakete sind in
C:\Users\Dean\AppData\Local\Temp\RtmpVRxlLZ\downloaded_packages
aktualisiere HTML
Hi Sebastien, take a look at the par(pty='s') argument. Maybe its can solve
your issue.
Best wishes.
Rodrigo.
-Mensagem original-
De: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] Em
nome de Sebastien Bihorel
Enviada em: segunda-feira, 20 de abril de 2009 12:26
You might also try looking in to Python. It has lots of mathematical and
computational libraries (numpy and scipy are particularly useful), as well
some to deal with concurrency (e.g. Parallel Python), and can interact with
R (rpy and rpy2).
Josh Stumpf
On Mon, Apr 20, 2009 at 8:49 AM, Juliet
On Mon, Apr 20, 2009 at 10:37 AM, Stefan Grosse singularit...@gmx.net wrote:
I know of people doing optimization stuff which needs a
lot of computational power. They use Matlab since it is easy for them
to use multiple processors (+multiple pc's). R at the moment only uses
one processor and
Nina,
did you try to install this package using some other mirror?
Dimitri
On Mon, Apr 20, 2009 at 1:35 PM, Tijana Gonja tijana.go...@gmail.com wrote:
Hi
I tried to install the sem package and it was succsessful but I keep getting
the following message
Paket 'sem' erfolgreich ausgepackt und
They may stipulate word files for the manuscript, but during
submission, journals usually request EPS or PDF formats. In fact, all
I've dealt with stipulate NEVER include graphcis into a Word document.
May be worth checking again!
Mark
2009/4/20 jjh21 jjhar...@gmail.com:
Hello,
The journal
Hello!
I think I am relatively clear on how predictor importance (the first
one) is calculated by Random Forests for a Classification tree:
Importance of predictor P1 when the response variable is categorical:
1. For out-of-bag (oob) cases, randomly permute their values on
predictor P1 and then
Hello,
This is probably off-topic but have the R community ever organized R
Golf contents similar to Perl Golf: http://perlgolf.sourceforge.net/ ?
It would be nice to see how R gurus solve problems in many different
ways (although you see it at this list every day :-)).
Regards,
-L
On 4/20/2009 2:35 PM, Brendan Morse wrote:
Hi everyone, I am trying to calculate a particular variable (vector) from
some previously defined variables in a loop but I am having trouble figuring
out how to get the loop to recognize that it should index for the previously
defined objects. Here is
Brendan,
I think you should create objects outside of the for loop. You can't
create objects instide the loop. You can try this:
metalist1-list()
for(i in 1:10)
{metalist1[[i]]-assign(paste(theta1_,i,sep=),data.frame(scale(rnorm(250}
lapply(metalist1,function(x){print(dim(x))}) # Checking
Dear R helpers,
I have a data set with 4 types (W, C, E S). Now I have values for all
types plus all possible combinations (the order is unimportant): W, C,
WC, E, WE, CE, WCE, S, WS, CS, WCS, ES, WES, CES WCES. Ideally I would
like to represent everything in one graph and as concise as
Hello All,
I am working on graph object using IGRAPH package wanted to do Bonacich
Power. This is my graph object.
The file 'Graph.RData' (4.2 MB) is available for download at
http://dropbox.unl.edu/uploads/20090424/cfe4fcb854bb17f2/Graph.RData
Graph size
Vertices: 20984
Edges: 326033
Hi Brendan,
If you really, really want to work with the for() loop, then
for(i in 1:10){
assign(paste(theta1_,i,sep=),data.frame(scale(rnorm(250
assign(paste(theta2_,i,sep=),data.frame(scale(rnorm(250
assign(paste(theta3_,i,sep=),
Hi everyone, I am trying to calculate a particular variable (vector) from
some previously defined variables in a loop but I am having trouble figuring
out how to get the loop to recognize that it should index for the previously
defined objects. Here is a simplified version of what I am trying to
Dieter Menne wrote:
wolfgang.siewert wolfgang.siewert at gmail.com writes:
There is a way around:
round(0.7-0.3,1)==0.4
(TRUE)
Obviously there is a problem with some combinations of decimal subtractions,
that - we have the feeling - shouldt be solved.
Oh no, not that one again! This was
What things you should learn in addition to R depends on what types of things
you want to do. But here are some of the programs that I recommend people take
a look at:
gnuplot
ggobi
Imagemagick
LaTeX
xfig
Make
Emacs (or other programming editor)
SQL
Perl (or other scripting language)
Tk
Dear Tijana,
I'm afraid that I can't entirely read the messages, but the problem
doesn't look like it's peculiar to the sem package. It appears as if
the package may have been properly installed but you didn't have
permission to update HTML help links. If that's the case, then you can
still load
Hi Folks,
I just upgraded R to the latest R version 2.9.0 (2009-04-17)
(from the Debian Etch repository). It seems to me that it
at least starts up much faster than it used to and, though I
don't have comparative timing data for long jobs, also that
it does its work faster. Is that just an
http://en.wikipedia.org/wiki/Venn_Diagram#Extensions_to_higher_numbers_of_sets
shows a couple of solutions, not in R, but the ideas could be implemented in R.
Hope this helps,
--
Gregory (Greg) L. Snow Ph.D.
Statistical Data Center
Intermountain Healthcare
greg.s...@imail.org
801.408.8111
Hi,
Gavin Simpson wrote:
I bemoan the apparent inability of those asking such questions to use
the resources provided to solve these problems for themselves...
Looking at all the people who quite obviously do NOT read the posting
guide and provide commented, minimal, self-contained,
Hi Nigel -- ask on the Bioconductor mailing list.
http://bioconductor.org/docs/mailList.html
Look at their package descriptions.
http://bioconductor.org/packages/release/Software.html
Martin
Nigel Birney wrote:
Hi,
I have Agilent and Illumina SNP data. That's the only thing I know
Thanks a lot! That is exactly what I was looking for!
Best wishes
Johannes
--
Project Coordinator BIOTA West Amphibians
Museum of Natural History
Dep. of Research (Herpetology)
Invalidenstrasse 43
D-10115 Berlin
Tel: +49 (0)30 2093 8708
Fax: +49 (0)30 2093 8565
http://www.biota-africa.org
On Mon, 20 Apr 2009, Bryan Lim wrote:
I've been working with a rather large data set (~10M rows), and while biglm
works beautifully for generating coefficients, it does not report an
r-squared. It does report RSS. Any idea on how one could coax an R-squared out
of biglm?
Hmm. I don't ever
I can't seem to find MASS for the latest version of R. Is it coming or has
the name of the package changed?
Tom
--
View this message in context:
http://www.nabble.com/R-2.9.0-MASS-package-tp23144198p23144198.html
Sent from the R help mailing list archive at Nabble.com.
Tom La Bone wrote:
I can't seem to find MASS for the latest version of R. Is it coming or has
the name of the package changed?
Tom
Where did you look?
It is in the sources (as part of VR), and also in my (SUSE) test builds.
--
O__ Peter Dalgaard Øster Farimagsgade 5,
In Windows Xp Pro:
R2.8.1 USA(CA1) repository
markerSearchPower
MASS(VR)
MasterBayes
R2.9.0 USA(CA1) repository
markerSearchPower
MasterBayes
MASS is not where it used to be. I checked a couple of other repositories in
the US and got similar results.
Tom
Peter Dalgaard wrote:
Tom
Dear all,
I have two series of returns and I want to find the cross-correlations
between these two series. I know of the ccf, but it does not work as I'd
like
if i type
ccf(x,y,lag.max=20,type=correlation,plot=FALSE)
i got the error message
Error in na.fail.default(ts.intersect(as.ts(x),
Le lundi 20 avril 2009 à 21:04 +0200, Penner, Johannes a écrit :
Dear R helpers,
I have a data set with 4 types (W, C, E S). Now I have values for all
types plus all possible combinations (the order is unimportant): W, C,
WC, E, WE, CE, WCE, S, WS, CS, WCS, ES, WES, CES WCES. Ideally I
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