On Fri, 1 Jun 2012 09:27:58 -0700 (PDT)
pigpigmeow gloryk...@hotmail.com wrote:
Dear all,
I have a lot of problems on R-programming.
for example
my csv. file is ..
Date wrfRH wrfsolar wrfwindspeed wrfrain wrftd wrfta
21/10/2010 92.97 22.11 53.27 0 1546.337861 61.00852664
Dear list,
I'm trying to add a new dim to a multidimensional array. My array looks
like this
a1 - array(1:8, c(2, 2, 2))
dimnames(a1) - list(A = c(A1, A2),
B = c(B1, B2),
D = c(D1, D2))
I would like to add a new dim 'group' with the value low. Right
Arun and Rui Barradas: thankyou very much for sorting out
my issue. I got what I wanted.
Rainer Schuermann and Jeff Newmiller: thankyou very much
for your suggestion. I will take care of it in future.
regards
-
On Fri, 1 Jun 2012 19:47:05 -0700 (PDT)
arun
Dear R users,
You can literally safe my
life my telling me the solution of my problem. I have created matrix of a data
frame with 3 columns, with each column representing data of different year.
2
1
5
3
4
4
4
3
Hi all,
I am working with random forest on the large data set( 39).
I have a warning message : In matrix(integer(nrnodes * nt), ncol = nt) :
Reached total allocation of 3766Mb: see help(memory.size).
Can you have any suggestions?
Thanks,
Myriam
[[alternative HTML version deleted]]
Hi everyone, I'm stuck on my dissertation which is due next week. I'm a
business major student and my project is a comparative research on corporate
social responsibility (CSR) between Chinese and German firms. According to
my literature review, it's quite obvious that German firms have much
Looks like you've swapped x and y.
Sarah
On Friday, June 1, 2012, David Winsemius wrote:
On Jun 1, 2012, at 4:09 PM, jcrosbie wrote:
I can not get the point function to work with in my code.
The code:
AggOfTempMatrix$**CumSumPercentSize-c(
0.05265450, 0.05738490, 0.05865403,
Could someone tell me the difference between igraph and igraph0?
I searched the CRAN web site, but cannot find an explantion of the differences.
Thanks, Alan
[[alternative HTML version deleted]]
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Why is igraph 0.5.5 not on the igraph sourceforgwe home page?
[[alternative HTML version deleted]]
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R-help@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide
Would like to see this at the top again, as I think it did not get pick up
when I posted it initially.
Apologies, last try.
--
View this message in context:
http://r.789695.n4.nabble.com/Help-with-this-web-scrape-function-tp4632137p4632169.html
Sent from the R help mailing list archive at
@mr.parashar4 - If this not resolved yet, here is what can help
plot.new is trying to create a new object out of the standard point plot. I
believe you have not created a standard point plot, i.e. in your case,
plot(xm,ym). This will show the graphical plot window. Keep that window open
and then
Hello,
Try
a3 - array(dim=c(2, 2, 2, 2))
dn - dimnames(a1)
dn$group - c(low, high)
dimnames(a3) - dn
a3[] - a1 # to use [] keeps the dimensions
a3 # it fills a3 recycling a1 (two copies)
dim(a2)
dim(a3)
As you can see, 'a2' is not of the right dimensions, and 'a3' has now
two
Dear list,
I have install R15.0 on Ubuntu system using the source code. It is
install to my home directory. I have no root privilege. When I start
R, I got this warning message:
During startup - Warning message:
Setting LC_CTYPE failed, using C
How can I fix this?
Thanks.
On Sat, Jun 02, 2012 at 05:17:36PM +0200, Patrick Hausmann wrote:
Dear list,
I'm trying to add a new dim to a multidimensional array. My array looks
like this
a1 - array(1:8, c(2, 2, 2))
dimnames(a1) - list(A = c(A1, A2),
B = c(B1, B2),
D =
Dear list,
Some times I want to modify the pdf file which produced by R with
illustrator. But when I use Illustrator open the pdf file, it often
makes the pdf some little changed. Anyone have some suggestions? Is it
better to use other file type, not pdf? Or when I produced the pdf, I
should set
On Jun 3, 2012, at 07:40 , Ebrahim Jahanshiri wrote:
Dear list,
My code runs on 2.14.1 smoothly (with no error) but makes R crash on 2.14.2
and 2.15.0 with the usual windows message about R for windows GUI
front-end has stopped working... and as such I dont have any access to R
to get any
On Jun 2, 2012, at 15:43 , jalantho...@verizon.net wrote:
Why is igraph 0.5.5 not on the igraph sourceforgwe home page?
You'll have to ask the igraph developers... Possibly, they just ran out of
round tuits.
--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Thank you very much.
Memory problem or heat (of CPU?) is the main suspect here for me. But how
is it that 2.14.1 can run it but others can not I dont know (maybe some
mechanisms that prevent memory problem in 2.14.1 are not working in the
latest versions. One thing for sure is that the speed of
On 03/06/2012 07:34, Jinyan Huang wrote:
Dear list,
I have install R15.0 on Ubuntu system using the source code. It is
install to my home directory. I have no root privilege. When I start
R, I got this warning message:
During startup - Warning message:
Setting LC_CTYPE failed, using C
How
Sir,
I would like to create a combined line-bar plot, with the line up top and
bar plot below, but with the x-axes suppressed on the topmost plot, the
line and bar plot areas joined by a common line, and the x-axes (of dates)
joined to the bottom part of the bar plot.
i have been able to format
Hello again,
Sorry, I've misread your post and thought that you wanted the new dim to
have 'low' and 'high' values.
It's just 'low'. So dim=c(2, 2, 2, 1) and set dn$group to the first
value only.
And forget the final comments.
Rui Barradas
Em 03-06-2012 07:31, Rui Barradas escreveu:
Hello,
Yes. I think it is my environment variables problem. But I donot know
how to fix.
echo $LC_ALL
echo $LANG
en_US.UTF-8
On Sun, Jun 3, 2012 at 4:07 PM, Prof Brian Ripley rip...@stats.ox.ac.uk wrote:
LANG
__
R-help@r-project.org mailing list
On 03/06/2012 09:27, Jinyan Huang wrote:
Yes. I think it is my environment variables problem. But I donot know
how to fix.
That is described in the same manual.
echo $LC_ALL
echo $LANG
en_US.UTF-8
On Sun, Jun 3, 2012 at 4:07 PM, Prof Brian Ripleyrip...@stats.ox.ac.uk wrote:
LANG
No,
On 12-06-02 8:42 PM, Matthew Johnson wrote:
Sir,
I am now having a similar problem with the barplot: i cannot get the
margin text to 'stick'.
png(paste(drive, MoMUnit.png, sep=))
par(mar=c(10, 3, 2, 2), opar=(1,0,0,0))
I think opar is a typo.
Duncan Murdoch
mainnameUnit =
On Jun 3, 2012, at 10:27 , Jinyan Huang wrote:
Yes. I think it is my environment variables problem. But I donot know
how to fix.
echo $LC_ALL
echo $LANG
en_US.UTF-8
On Sun, Jun 3, 2012 at 4:07 PM, Prof Brian Ripley rip...@stats.ox.ac.uk
wrote:
LANG
First, use locale to check
locale
locale: Cannot set LC_CTYPE to default locale: No such file or directory
locale: Cannot set LC_ALL to default locale: No such file or directory
LANG=en_US.UTF-8
LANGUAGE=
LC_CTYPE=UTF-8
LC_NUMERIC=en_US.UTF-8
LC_TIME=en_US.UTF-8
LC_COLLATE=en_US.UTF-8
LC_MONETARY=en_US.UTF-8
On 03/06/2012 10:31, Jinyan Huang wrote:
locale
locale: Cannot set LC_CTYPE to default locale: No such file or directory
locale: Cannot set LC_ALL to default locale: No such file or directory
LANG=en_US.UTF-8
LANGUAGE=
LC_CTYPE=UTF-8
That's wrong: see the manual I pointed you to!
On Jun 3, 2012, at 11:36 , Prof Brian Ripley wrote:
ls -ld /usr/share/locale/en_US*
drwxr-xr-x 2 root root 4096 Dec 15 15:19 /usr/share/locale/en_US
This is clearly not an R issue: so ask your IT support for help.
Or check out the Ubuntu docs/forums for information on which package of
On 03.06.2012 09:17 (UTC+2), peter dalgaard wrote:
On Jun 3, 2012, at 07:40 , Ebrahim Jahanshiri wrote:
Dear list,
My code runs on 2.14.1 smoothly (with no error) but makes R crash on 2.14.2
and 2.15.0 with the usual windows message about R for windows GUI
front-end has stopped working...
The problem is that your graph is unconnected, it has two components
and the as.dendrogram() function in igraph cannot handle that.
fastgreedy.community() returns a matrix of merges that is not a
complete dendrogram, the final top level merge of the components is
missing.
A workaround is to
Since this appears to be Windows (not explicitly said), the likely
change is the compilers used for R = 2.14.2 differ from those used for
2.14.1. The posting guide does ask for 'at a minimum' information with
good reason. How big the change was depends on whether this was 32- or
64-bit
Perhaps not at all, since you are posting to the R-help list rather than
to the original poster of the question. You also forgot to quote the
original question as the posting guide asks you to do.
Uwe Ligges
On 03.06.2012 08:12, czar wrote:
@mr.parashar4 - If this not resolved yet, here is
On 03.06.2012 08:42, Jinyan Huang wrote:
Dear list,
Some times I want to modify the pdf file which produced by R with
illustrator. But when I use Illustrator open the pdf file, it often
makes the pdf some little changed. Anyone have some suggestions? Is it
better to use other file type, not
On 01.06.2012 21:05, Jin Choi wrote:
Hello,
I am trying to obtain the partial r-square values (r^2 or R2) for
individual predictors of an outcome variable in multiple linear
regression. I am using the 'lm' function to calculate the beta
coefficients, however, I would like to know the
Thank you.
1, I want to put some text and title. Then put several figures into one.
On Sun, Jun 3, 2012 at 10:59 PM, Uwe Ligges
lig...@statistik.tu-dortmund.de wrote:
On 03.06.2012 08:42, Jinyan Huang wrote:
Dear list,
Some times I want to modify the pdf file which produced by R with
This is the R-help mailing list. It is not a statistical consulting list
nor the others write my thesis list.
On 02.06.2012 14:56, Frankfoot wrote:
Hi everyone, I'm stuck on my dissertation which is due next week.
Interesting. The question given below should arise two years before the
On 03.06.2012 17:03, Jinyan Huang wrote:
Thank you.
1, I want to put some text and title. Then put several figures into one.
So just do it within R and use title() within R and use par() and its
argument mfrow to arrange several figures in rows and columns.
Uwe Ligges
On Sun, Jun 3,
On 02.06.2012 16:11, MYRIAM TABASSO wrote:
Hi all,
I am working with random forest on the large data set( 39).
I have a warning message : In matrix(integer(nrnodes * nt), ncol = nt) :
Reached total allocation of 3766Mb: see help(memory.size).
Can you have any suggestions?
Use anther
On 01.06.2012 20:08, jasminedawn wrote:
Hi,
I have encounter a problem that my data a_data.frame is of data.frame class
with columns: sequenceID, eventID, items.
when I convert it to transaction class:
as(a_data.frame, transactions)
All columns are grouped together under items, which is
On Jun 3, 2012, at 17:00 , Uwe Ligges wrote:
On 01.06.2012 21:05, Jin Choi wrote:
Hello,
I am trying to obtain the partial r-square values (r^2 or R2) for
individual predictors of an outcome variable in multiple linear
regression. I am using the 'lm' function to calculate the beta
I'd like to create a plot similar to this one from Kochanska et al.
(Development and Psychopathology, 2011):
http://pages.videotron.com/do999/r-help/Kochanska_graph_ros.jpg
http://pages.videotron.com/do999/r-help/Kochanska_graph_ros.jpg
I am new to ggplot2 and can't see any obvious way to
Hello,
I am going through Zhao's RDataMining PDF, and to redo all the graphics on
my computer, I need several packages, 'coin' and 'party' to name two.
I get the following error:
install.packages(coin)
Installing package(s) into ‘/home/sven/R/i686-pc-linux-gnu-library/2.15’
(as ‘lib’ is
If you wish to use the table in a write-up or something like this, there is a
package for exporting to MS Word - see
http://cran.r-project.org/web/packages/R2wd/index.html
http://cran.r-project.org/web/packages/R2wd/index.html and these examples
Hi.
I hope someone could help me with my question.
I have clinical scores of a longitudinal study:
4 treatments.
In each treatment j there are nj different subjects that were measured few
times (of course for each subject the measurements are dependent during time).
I want to check it with
Dear Carlos, Duncan and everyone
You may have already sorted the matter by now, but since I have not seen
anything posted since Duncan's reply, here I go. I apologize in advance
for the spam, if it turns out I've missed some post.
I think the test and the implementation of the truncgof package
Hi all,
I started using R about 3 weeks ago, and now I've pretty much figured out how
to do the types of statistical modeling, graphs, tables etc. that I frequently
use (with zero background in computer languages or other statistical packages
that are similar to R like S or SAS!). So it's been
Dear R users,
I have the following problem
I have a panel data across countries and individuals. For each country
I have a sequence of dates
For France for example
22/02/09
22/03/09
19/04/09
17/05/09
12/07/09
09/08/09
06/09/09
04/10/09
01/11/09
29/11/09
27/12/09
31/01/10
For Italy
14/06/09
Dear R-group,
Could somebody recommend a package that can deal with a multinomial response
variable (choice of breeding tactic in mice, which has four unordered levels),
multiply-imputed data (generated using the Amelia package) and two non-nested
random effects: individual identity (133
Dear R users,
is there a way in R to calculate normal reduced variate??
eliza
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On Jun 1, 2012, at 4:08 PM, David Winsemius wrote:
On Jun 1, 2012, at 12:27 PM, pigpigmeow wrote:
Dear all,
I have a lot of problems on R-programming.
for example my csv. file is ..
That certainly does not look like any csv file I have ever seen.
Date wrfRH wrfsolar
Hi jacaranda,
Try
with(subset(mydata, Group1 == 1), cor.test(Gen, MSELEL, method = pearson))
HTH,
Jorge.-
On Sun, Jun 3, 2012 at 11:51 AM, jacaranda tree wrote:
Hi all,
I started using R about 3 weeks ago, and now I've pretty much figured out
how to do the types of statistical modeling,
On Jun 2, 2012, at 9:38 PM, eliza botto wrote:
You might consider the strategy of reading the Posting Guide, followed
by posting an intelligible message.
Dear R users,
You can literally safe my
life my telling me the solution of my problem. I have created matrix
of a data
frame with 3
On Jun 3, 2012, at 17:57 , eliza botto wrote:
Dear R users,
is there a way in R to calculate normal reduced variate??
Yes. It depends on what you mean, though. AFAICT reduced is just what others
call standard normal (mean 0, variance 1), so rnorm(n, 0, 1) is one answer; z
- (X - mu)/s is
thankyou very much for answer. i want to calculate normal reduced variate of a
matix consisting of 366 rows and 92 columns. how can i do that??
please reply if you know the answer..
eliza
Subject: Re: [R] reduced variate in R
From: pda...@gmail.com
Date: Sun, 3 Jun 2012 19:11:55 +0200
CC:
Hello,
Try
scale(x)
Half of homework done.
The other half is to have a quick look at R-intro.pdf, it comes with
every installation of R. Chapters 8 and 12.
Hope this helps,
Rui Barradas
Em 03-06-2012 18:15, eliza botto escreveu:
thankyou very much for answer. i want to calculate normal
Dear useRs,
I've ran some additional analyses (see below), which strongly suggest
the standard errors of the bam (and gam) function are much too low in
mgcv version 1.7-17, at least when including an s(X,bs=re) term.
Until this issue has been clarified, it's perhaps best to use an older
version
The error says you are missing the BLAS library... so install it?
---
Jeff NewmillerThe . . Go Live...
DCN:jdnew...@dcn.davis.ca.usBasics: ##.#. ##.#. Live Go...
This is an I was just wondering question.
When the package dataframe was announced, the author claimed to
reduce the number of times a data frame was copied, I started to
wonder if I should care about this in my projects. Has anybody
written a general guide for how to write R code that doesn't
On Fri, Jun 1, 2012 at 2:05 PM, Jin Choi oohps...@gmail.com wrote:
Hello,
I am trying to obtain the partial r-square values (r^2 or R2) for
individual predictors of an outcome variable in multiple linear
regression. I am using the 'lm' function to calculate the beta
coefficients, however, I
Hi all,
probably really simple to solve, but having no background in programming I
haven't been able to figure this out: I have two dataframes like
df1 - data.frame(names1=c('aa','ab', 'ac', 'ad'), var1=c(1,5,7,12))
df2 - data.frame(names2=c('aa', 'ab', 'ac', 'ad', 'ae'),
var2=c(3,6,9,12,15))
On Jun 3, 2012, at 9:27 AM, stef salvez wrote:
Dear R users,
I have the following problem
I have a panel data across countries and individuals. For each country
I have a sequence of dates
For France for example
22/02/09
22/03/09
19/04/09
17/05/09
12/07/09
09/08/09
06/09/09
04/10/09
01/11/09
Hello,
One way, with limited applicability, would be
df4 - cbind(df2, var1=NA)
df4$var1[ df2$names2 %in% df1$names1 ] - df1$var1
df4
Limited because it doesn't resist to duplicate key values (the columns
names1/2).
But with unique keys it should be much more efficient, speed- and
Hmm interesting. To come to think of it there could be many disconnected
components in the graph and thus there should be a generic way to either
mitigate the disconnectedness in the dendrogram or in the original graph. I had
no luck in finding such a trick though google search. I then ran the
On Sun, Jun 3, 2012 at 4:05 PM, Matthew Johnson mcoog...@gmail.com wrote:
Thanks. So i can call par after the layout command? I did not realise.
Some par options are set by calling par() directly, while others must
be included in the plot command itself.
Sarah
Sent from my iPad
On
My question was answered off list by Paul Murrell, author of 'grid'. Here's am
excerpt of our email exchange for the records of R-help.
Paul Murrell
In some special cases, you would be able to flip shapes. If the
coordinates of the shapes are given in native coordinates,
On Jun 3, 2012, at 3:22 PM, Kai Mx wrote:
Hi all,
probably really simple to solve, but having no background in
programming I
haven't been able to figure this out: I have two dataframes like
df1 - data.frame(names1=c('aa','ab', 'ac', 'ad'), var1=c(1,5,7,12))
df2 - data.frame(names2=c('aa',
R-folks: Sorry for the cross-posting, but I wanted to share a link to
a (fairly long) blog post I created which tries to take the mystery
out of getting R setup for doing high performance/parallel computing
if you have to compile R from scratch:
Thanks. The solution i have been persuing is reading Murrell - and
trying to figure out grid / Viewport commands. Is it best to stay in
the base graphics package if possible?
Sent from my iPad
On 04/06/2012, at 6:20 AM, Sarah Goslee sarah.gos...@gmail.com wrote:
On Sun, Jun 3, 2012 at 4:05 PM,
On Sun, Jun 3, 2012 at 5:02 PM, Matthew Johnson mcoog...@gmail.com wrote:
Thanks. The solution i have been persuing is reading Murrell - and
trying to figure out grid / Viewport commands. Is it best to stay in
the base graphics package if possible?
It really depends on what you need to do.
Hi,
Another option that you might want to try is the tikzDevice package;
tikz has functions to flip and rotate objects and could it from R with
tikzAnnotate / tikzAnnotateGrob. Of course these objects would not
really be grobs but tikz code, though for text the end result would
probably be the
Thank you.
Sent from my iPad
On 04/06/2012, at 7:12 AM, Sarah Goslee sarah.gos...@gmail.com wrote:
On Sun, Jun 3, 2012 at 5:02 PM, Matthew Johnson mcoog...@gmail.com wrote:
Thanks. The solution i have been persuing is reading Murrell - and
trying to figure out grid / Viewport commands. Is it
I'm not really an expert on BLAS-y things, but wouldn't there be more
problems upstream with R if it weren't able to find the local BLAS? I
was under the impression that R shipped it's own BLAS but could also
be directed to one at compile time -- either way, I would guess that
many other would
CRAN (and crantastic) updates this week
New packages
* anametrix (0.1)
Maintainer: Roman Jugai
Author(s): Roman Jugai
License: LGPL
http://crantastic.org/packages/anametrix
Connects to Anametrix API and extracts data into R data structure
* assertive (0.1-4)
On Sat, Jun 2, 2012 at 3:19 AM, farmedgirl ksteinm...@cdpr.ca.gov wrote:
Hi
i need to create a model from 250 + variables with high collinearity, and
only 17 data points (p = 250, n = 750). I would prefer to use Cp, AIC,
and/or BIC to narrow down the number of variables, and then use VIF to
Dear
R users,
We
are working on a project called,Environmental Impact Assessment. We are
stationed
at alpine regions of Ireland to see the impact of rainfall on localities. We
have
divided our study area into 92 stations. We have also collected 1 year data
from each station. Afterwards we
Hi Eliza
You will not want 1 panel with 96 lines - too confusing after about 20
Instead 1 per panel or with groups using useOuterStrips and
combineLimits from latticeExtra package
Try this -- a minimal example with an 12 row 8 col grid done on the fly
setseed(12)
Sites - 1:92
dat -
Thank you for your suggestion.
Do you have some example codes using ggplot2 or grid.arrange() and
arrangeGrob to composite figures?
On Mon, Jun 4, 2012 at 7:36 AM, Neil Collier neilander...@gmail.com wrote:
ggplot2 handles all of these requirements. I highly recommend using it for
composite
Dear R help,
I am using intxplot() from the library(HH). I have a dataset with 12 treatment
groups. At first, I tried intxplot with no color settings. Then, the legend
color was matching with the plot line colors, but some of the colors were
repeated. So, I set the colors using
Hi Antony,
I am sending this message again as it was not yet posted by the rhelp.
One more solution:
dat2-read.table(text=
ABC PQR XYZ
42 29 22
65 22 78
10 20 30
40 50 60
70 80 90
61 15 24
,sep=,header=T)
exprv - expression(c( ABC10 XYZ 30 PQR 90,ABC 9 XYZ
HI,
I am not sure about whether your subset function is correct. If you look into
this link (http://stat.ethz.ch/R-manual/R-devel/library/base/html/subset.html),
it says about how to use subset (subset(data, condition) instead of
(subset=data==condition). Also, the one I am describing about
R-folks. Sorry for the cross-posting, but I wanted to share a link to
a (fairly long) blog post I created which tries to take the mystery
out of getting R setup for doing high performance/parallel computing
if you have to compile R from scratch:
I am using the worksheet functions of RExcel. I am trying to pass a datatable
to a function in the following call:
=RApply(O14:O18,D6)
Cells O14:O18 contain the definition of the function. This is a function that
takes one argument which is a data.table. Cell D6 has the name of the
ggplot2 handles all of these requirements. I highly recommend using it for
composite figures. Try the grid.arrange() and arrangeGrob in the
'gridExtra' package in addition to ggplot2.
On Mon, Jun 4, 2012 at 1:08 AM, Uwe Ligges
lig...@statistik.tu-dortmund.dewrote:
On 03.06.2012 17:03, Jinyan
Martin -- I know this is about a year late, but I have to thank you for
taking the time to answer Ram's question in this thread. It helped me get
Rgraphviz up and running. I've been struggling with this for about 90
minutes, so thank you so much!
And to anyone else who may run upon this
Hi All,
After a lengthy battle just to get the package installed, I am not able to
actually use Rgraphviz to generate any plots. I tried just using the sample
code in the documentation
(http://www2.warwick.ac.uk/fac/sci/moac/people/students/peter_cock/r/rgraphviz/)
and I get the following:
*
At last, the administrator provide me this command to fix this problem.
echo setenv LC_ALL en_US.UTF8 ~/.cshrc.aliases
On Sun, Jun 3, 2012 at 5:47 PM, peter dalgaard pda...@gmail.com wrote:
On Jun 3, 2012, at 11:36 , Prof Brian Ripley wrote:
ls -ld /usr/share/locale/en_US*
drwxr-xr-x 2
Hi,
I am getting the following error while trying to install RPostgreSQL.
I tried all three methods(install.packages(RPostgreSQL, type =
source),install.packages(RPostgreSQL) R CMD INSTALL
RPostgreSQL_0.3-1.tar.gz ) , but none of them is working.
++
Hello,
You got the detail of the error:
RS-PostgreSQL.h:23:26: fatal error: libpq-fe.h: No such file or directory
compilation terminated.
Please searc on Internet libpq-fe.h. You will get answer to your problem.
Regards
- Mail original -
De : Prakash Thomas pthomas2...@gmail.com
À :
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