On Fri, Aug 15, 2014 at 4:06 PM, Rolf Turner r.tur...@auckland.ac.nz wrote:
OTOH R is still lacking a mind_read() function so it probably
would NOT give you *exactly* what you want.
We can try the (very pre-alpha) esp package:
source('g:/R/esp/esp.R')
esp()
[1] piccalilli crawlspace mole
On Aug 16, 2014, at 1:54 AM, Lotte de Vries wrote:
snipped all of your and my earlier material because you have included
everything needed for an answer in your current question..
Hi David,
Let me try this again, apologies.
I'm trying to run the package posum
Hi,
I have a data.table question (as well as if else statement query).
I have a large list of families (file has 935 individuals that are
sorted by famiy of varying sizes). At the moment the file has the
columns:
SampleID FamilyID Relationship
To prevent from having to make a pedigree file by
Dear Kate,
Assuming you have nuclear families, one option would be:
x - read.table(textConnection(Family.ID Sample.ID Relationship
14 62 sibling
14 94 father
14 63 sibling
14 59 mother
17 6004 father
17 6003 mother
17 6005
On 17/08/14 01:57, Greg Snow wrote:
On Fri, Aug 15, 2014 at 4:06 PM, Rolf Turner r.tur...@auckland.ac.nz wrote:
OTOH R is still lacking a mind_read() function so it probably
would NOT give you *exactly* what you want.
We can try the (very pre-alpha) esp package:
source('g:/R/esp/esp.R')
Thanks!
I think I know what is being done here but not sure how to fix the
following error:
Error in l$PID[l$\Relationship == sibling] - l$Sample.ID[father] :
replacement has length zero
On Sat, Aug 16, 2014 at 6:48 PM, Jorge I Velez jorgeivanve...@gmail.com wrote:
Dear Kate,
Assuming
Actually - I didn't check this before, but these are not all nuclear
families (as I assumed they were). That is, some don't have a father
or don't have a mother Usually if this is the case PID or MID will
become 0, respectively, for the child. How can the code be edit to
account for this?
Yep - you're right - missing parents are indicated as zero in the M/PID field.
The above code worked with a few errors:
1: In l$PID[l$Relationship == sibling] - l$Sample.ID[father] :
number of items to replace is not a multiple of replacement length
2: In l$PID[l$Relationship == sibling] -
Actually - your code is not wrong... because this is a large file I
went through the file to see if there was anything wrong with it -
looks like there are two fathers or three mothers in some families.
Taking these duplicates out fixed the problem.
Sorry about the confusion! And thanks so much
Thanks for your thoughts, Sarah and Jeff! I do appreciate the time and
effort. I will refrain from posting a link to a GIST as the main part of my
response. But I still like the idea, but I'm going to modify it a bit. For
any replies that I make which are not 3 or 4 lines, I'm going to create a
On Sat, Aug 16, 2014 at 9:02 PM, Kate Ignatius kate.ignat...@gmail.com
wrote:
Actually - your code is not wrong... because this is a large file I
went through the file to see if there was anything wrong with it -
looks like there are two fathers or three mothers in some families.
Taking these
gracias Patricio, tienes toda la razón en porque lo llamo excel, y
realmente es la fuente la que está poniendo está extensión (son ficheros de
instalaciones de energías renovables del Ministerio de Industria -
https://oficinavirtual.mityc.es/ripre/informes/informeinstalaciones.aspx )
Saco un par
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