Re: [R] Question regarding different R versions on an enterprise network server

3.2 library is in a different directory than 3.1 library. You might benefit from reading the discussion about packages in the installation manual for R. --- Jeff NewmillerThe . . Go

Re: [R] Question regarding different R versions on an enterprise network server

Assaf: they are named differently when you run different versions. 3.1 and 3.2 are different, but 3.1.1 and 3.1.2 are both in the 3.1 directory. --- Jeff NewmillerThe . . Go Live

Re: [R] Debian Rcmdr misses sem leaps etc

For those R packages, as a normal user (rather than sysadmin of a shared computer) the OP should accept the default R/3.1 subdirectory in their home directory. --- Jeff NewmillerThe

Re: [R] Roxygen Documentation

I think you are looking for a way to make a vignette. Consider using the Sweave variant of knitr. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] R programming

time --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (

Re: [R] problem with duplicated function

w.com/questions/5963269/how-to-make-a-great-r-reproducible-example --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Li

Re: [R] Trouble with SPI package

input file, and remove the line that overwrites it from your code. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] How do I move the horizontal axis in a plot so that it starts at the zero of the vertical axis?

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded

Re: [R] About performance of R

It is not a decision that R should automatically make. b) Most performance issues with R arise due to users choosing inefficient algorithms. Inserting parallelism inside existing algorithms will not fix that. --- Jeff

Re: [R] Using lapply when there are dependencies

s has already been done for you (see ?filter). [1] https://stat.ethz.ch/pipermail/r-help//2014-December/424027.html --- Jeff NewmillerThe . . Go Live... DCN:B

Re: [R] Converting unique strings to unique numbers

you asked for one column at a time. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead:

Re: [R] Toronto CRAN mirror 403 error?

This is why there are mirrors. You don't have to wait for them or tell them to do their jobs. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Li

Re: [R] Arrays of variable dimensionality

the "aperm" function. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#

Re: [R] lattice contourplots

What does quartz() have to do with this? If quartz is the problem, R-sig-mac would be a better place to ask. Or are you being bitten by R FAQ 7.22? --- Jeff NewmillerThe . . Go Live

Re: [R] lattice contourplots

The help for for contourplot answers this question in the description of the formula (x) argument. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] lattice contourplots

Sorry, my first response was too hasty. Per the help file you need to use some kind of interpolation method to resample whatever random data points you have in a regular grid before you give it to contourplot. --- Jeff

Re: [R] building a list in a loop

-reproducible-example --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research

Re: [R] Cross tabulation with top one variable and side as multiple variables

data in cross tabulation form. You could use table or perhaps the tables package to render the data into the desired form. --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] reading as date

Your example is not the same as the answers you have received. Look again. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] How to validate the cluster analysis?

these issues. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Eng

Re: [R] Help with abs function

FAQ 7.31 --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research

Re: [R] Marascuilo procedure

Your question is about statistics, not R. Do read the Posting Guide to inform you for future questions. Meanwhile, you should probably go to stats.stackexchange.com. --- Jeff NewmillerThe

Re: [R] Installing R 2.15.2 on Mac

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O

Re: [R] matrix/df help populate NA

?merge Particularly look at the all argument. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO

Re: [R] Exporting from R to Excel or .csv

said, I avoid creating such complex output formats as much as possible... one data frame = one file is much more portable. --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] two problems

using R before diving into such murky waters, but if you want to push forward you will need to use a search engine and perhaps make email contact with the package author if you need help. --- Jeff Newmiller

Re: [R] issue in running timeseries forecasting related package

has upgraded in the second digit (e.g. 3.1.2 to 3.2.0) then you may need to refresh your personal package library with contributed packages protested for your new version of R. --- Jeff NewmillerThe

Re: [R] 3D point cloud fitting

--- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded Controllers

Re: [R] Returning the coefficient parameters from JRI

I don't use JRI, but the data seem to be there. If you are looking for the row names, try ?rownames. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#.

Re: [R] repeated measures: multiple comparisons with pairwise.t.test and multcomp disagree

Bert, can you be more specific about which article for those of us who don't subscribe? --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Li

Re: [R] Remote Connection

ard networking setup. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. wit

Re: [R] Stream package

"Real time" is a squishy term. Your question is not one that can be answered here, since it is so context dependent. --- Jeff NewmillerThe . . Go Live... DCN:

Re: [R] Subset() within function: logical error

to do with the pieces and less about making pieces. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live

Re: [R] erro during make

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with

Re: [R] Is there a package for Granger causality in panel models?

I don't know, but I highly recommend the "sos" package so you can answer this for yourself. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#.

Re: [R] Ramanujan and the accuracy of floating point computations - using Rmpfr in R

curate when you have loaded that package. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.

Re: [R] : Ramanujan and the accuracy of floating point computations - using Rmpfr in R

But not 120 bits of pi... just 120 bits of the double precision version of pi. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] How to feed graphic device (png, jpeg etc) with different files names

Use dev.off and re-open the device. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO

Re: [R] Greek letters in column titles.

This does not clarify. Please re-read Bert's response and try again. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Li

Re: [R] geom_segment drop unused levels

Not reproducible. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing

Re: [R] geom_segment drop unused levels

Sorry, now it works for me as well. And yes, must drop rows with is.na( prace ) prior to calling ggplot. Note that the levels of prace do not contain NA so your subject line is not correct. --- Jeff Newmiller

Re: [R] detecting any element in a vector of strings, appearing anywhere in any of several character variables in a dataframe

I think grep is better suited to this: zz$v5 <- grepl( paste0( alarm.words, collapse="|" ), do.call( paste, zz[ , 2:3 ] ) ) ) ------- Jeff NewmillerThe . . Go Live... DCN:

Re: [R] detecting any element in a vector of strings, appearing anywhere in any of several character variables in a dataframe

Just add a word break marker before and after: zz$v5 <- grepl( paste0( "\\b(", paste0( alarm.words, collapse="|" ), ")\\b" ), do.call( paste, zz[ , 2:3 ] ) ) ) ------- Jeff New

Re: [R] randomForest set.seed()

ct.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. ---

Re: [R] sum some columns for each row

select the subset of columns to work with, and the rowSums function to do the calculations. Something like dta$abc <- rowSums( dta[ , grep( "abc", names( dta ) ) ] ) ------- Jeff Newmiller

Re: [R] Compiling on AIX 6.1

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software

Re: [R] Corrected: approaches tpmatrix multiplication of each layer of 3-d array with different matrix

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded

Re: [R] Corrected: approaches to matrix multiplication of each layer of 3-d array with different matrix

EE[,,1] <- A[,,1] %*% B[,,1] EE[,,2] <- A[,,2] %*% B[,,2] EE[,,3] <- A[,,3] %*% B[,,3] etc. ------- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#.

Re: [R] Trellis Plots: translating lattice xyplot() to ggplot()

extra little effort to dput some example data so we can communicate clearly about your problem. [1] [1] http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example --- Jeff Newm

Re: [R] (no subject)

providing appropriate resources to assist the student so we should not have to second guess them anyway. Reducing list volume is at best a secondary concern from my perspective. --- Jeff NewmillerThe

Re: [R] Do grep() and strsplit() use different regex engines?

"\\b" is a zero length match. strsplit seems to chop at least one character off the beginning of the string if it sees a match, and then it looks at the shortened string that remains and repeats. --- Jeff

Re: [R] Do grep() and strsplit() use different regex engines?

;red green") [1] 1 ## as expected Does strsplit use a different regex engine than grep()? Or more likely, what am I misunderstanding? Thanks. Bert David Winsemius Alameda, CA, USA __ R-help@r-project.org mailing list -- T

Re: [R] data$variable=factor(....)

re, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. --- Jeff Newmiller

Re: [R] Rolling Window Granger Causality

ing-guide.html and provide commented, minimal, self-contained, reproducible code. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go...

Re: [R] Knitr/Lattice/Lyx [was: Trellis Plots: translating lattice xyplot() to ggplot()]

Read the Posting Guide. Most attachments get stripped on the list to discourage viruses and encourage small, reproducible examples in the body of the email. --- Jeff NewmillerThe

Re: [R] merge: right set overwrite left set

on, indv3 is from x.HHu, and the rest position and indv1 and indv2 are from y.HHo HHid position ind3 indv1 indv2 1 HH1 10 0 2 0 2 HH10101 0NA 2 3 HH11111 NA NA NA 4 HH2 20 0 0

Re: [R] sum some columns for each row

an suggest ways to fix it in R. ------- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#..

Re: [R] sum some columns for each row

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded

Re: [R] Parsing large amounts of csv data with limited RAM

annot advise you on ff. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Pl

Re: [R] Problem in installing simba package

Wait? Try a different server? Verify your internet settings? --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] cronbachs alpha and missing values

function is in a contributed package then you should load that package first. Documentation quality may vary due to volunteer dedication, but it often answers questions like this. --- Jeff NewmillerThe

Re: [R] error message in package "FD", function dbFD ()

the help page for the FD package? Try ?FD-package [1] http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example --- Jeff NewmillerThe . . Go Live... DCN

Re: [R] ‘ips’ had non-zero exit status

b page for the XML package mentions libxml2. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.

Re: [R] nls singular gradient matrix with an integrand

Very few attachment types are permitted on the R mailing lists... apparently whatever file you attached did not qualify. --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] installation of package ‘devtools’ had non-zero exit status in a POWERPC

That is an operating-system configuration question, not a question about R. There are many OSs out there... please find a forum with users of your OS in which to pursue this question. --- Jeff Newmiller

Re: [R] OPTIMX: non-finite finite-difference value [26] and scaling problem

uide.html and provide commented, minimal, self-contained, reproducible code. -- ------- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. #

Re: [R] To simplify or not simplify?

to validate your model against a data set set aside for that purpose. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] Infinite Series

?cumsum --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research

Re: [R] Infinite Series

Please reply-all so the mailing list stays in the loop. cumsum(1/(1:100)^2) gives you the partial sums up through i=100. --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] about R 3.2.0

task. Usually you can copy your old library directory onto the new one and update.packages to update them. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#.

Re: [R] Compute z

y until it sinks in. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. wit

Re: [R] Sample Weights

between a data frame and a vector is... if it helps, a data frame is a list of vectors (typically referred to as "columns") all with the same length... your "mydat" is a vector, not a data frame. ----

Re: [R] Sample Weights

s about that function. If that is too terse, get a text book. [2] https://cran.r-project.org/web/views/Multivariate.html [3] http://stackoverflow.com/questions/5963269/how-to-make-a-great-r-reproducible-example -----

Re: [R] R package with Fortran module on Windows? undefined reference to `__stack_chk_fail'

You went to all that trouble to find a mailing list to ask your question on and failed to find R-packages or R-devel? --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] Global variables

Please don't. Function arguments are good... global variables are bad. one <- function(){ result <- list( a="variable passed" ) result } two <- function( v ){ print( v$a ) } x <- one() two( x ) ---

Re: [R] Daily Category Revenue-Stacked Bar Chart in ggplot2

at https://stat.ethz.ch/mailman/listinfo/r-help and using your email client to send emails rather than posting on a web page. --- Jeff NewmillerThe . . Go Live... DCN:Basics

Re: [R] Daily Category Revenue-Stacked Bar Chart in ggplot2

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded

Re: [R] R parallel - slow speed

) so you end up needing more memory and disk paging of virtual memory becomes more likely. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] dplyr and function length()

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O#. with /Software/Embedded

Re: [R] Release schedule (was (no subject) )

New versions are released when they are ready. This is volunteer-driven software. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] Release schedule (was (no subject) )

So 3.1.3 to 3.2.0 was a major release? --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead

Re: [R] Why does R start in wrong working directory despite R_USER setting?

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O

Re: [R] creating a funct

users group, for example. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO

Re: [R] Plotting wind direction as arrows with precipitation

, format="%m/%d/%Y %H:%M") The other problem I see is that you probably need to have your data in long form to get the results you want, so you should look at the vignettes for the reshape2 or tidyr packages. --

Re: [R] install.package - CaTools

. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/BatteriesO.O#. #.O

Re: [R] nls in r

zeros can also be employed to set bounds/starting points for searching, but those topics are in general completely orthogonal to the topic of this mailing list... which is R. --- Jeff NewmillerThe

Re: [R] Doing PDF OCR with R

This code is using R like a command shell... there really is not much chance that R is the problem, and this is not a "tesseract" support forum, so this seems quite off-topic. --- Jeff Newmiller

Re: [R] stringr package question

19 +datum=WGS84 +units=m +no_defs +ellps=WGS84 +towgs84=0,0,0", "\\+proj=[a-zA-Z0-9]*") Please read and follow the Posting Guide, including sending your emails using plain text instead of HTML. ------- Jeff Newmil

Re: [R] stringr package question

[[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html

Re: [R] Error while submission

Go to where you were given this assignment and ask them for help. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go

Re: [R] Statistic_help

(e.g. stats.stackexchange.com) but I have a feeling you would be better served to take a course on the topic or hire an expert. --- Jeff NewmillerThe . . Go Live... DCN:B

Re: [R] move date-values from one line to several lines

u have a lot of data to work with... again, just syntactic sugar, but convenient. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Researc

Re: [R] Regarding new version of R library

I suggest that you contact the maintainer of that package, who should be identified by using the maintainer function (see ?maintainer) or on the website where you obtained it. --- Jeff NewmillerThe

Re: [R] combining unequal dataframes based on a common grouping factor

. but the actual data can affect how well any solution works so giving us dput output is crucial. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Li

Re: [R] outputs of a function

int or modify as you wish can be quite useful later. ------- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go...

Re: [R] Getting the most recent dates in a new column from dates in four columns using the dplyr package (mutate verb)

an use that more efficiently than testing which rows have na.date.cases==1. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.

Re: [R] Run script automatically on several input files in the directory and produce separate outputs?

names <- list.files( inputdir, full.names=TRUE ) lapply( fnames, myplotfilecreator ) --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go...

Re: [R] Rename multiple files in a directory and write renamed files back to directory

to the seq function, so perhaps you should read ?seq --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go...

Re: [R] How to build a vignette?

ng R Extensions" documentation. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#

Re: [R] How to build a vignette?

ckage. --- Jeff NewmillerThe . . Go Live... DCN:Basics: ##.#. ##.#. Live Go... Live: OO#.. Dead: OO#.. Playing Research Engineer (Solar/Batt

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