[R] summary function did not work with multcomp with 27 comparisons

to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. [R.app GUI 1.70 (7543) x86_64-apple-darwin15.6.0] [History restored from /Users/friedman/.Rapp.history] objc[317

[R] summary function does not work with Westfall correction in multcomp with 27 comparisons

rwin15.6.0] [History restored from /Users/friedman/.Rapp.history] objc[31790]: Class FIFinderSyncExtensionHost is implemented in both /System/Library/PrivateFrameworks/FinderKit.framework/Versions/A/FinderKit (0x7fff9c2b7c90) and /System/Library/PrivateFrameworks/FileProvider.framework/Overr

[R] Creating a data frame

I keep getting error messages when running my data frame code and I cannot figure out what I am doing wrong. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see

Re: [R] Using R Studio Version 0.98.507, having trouble with read.table and an Excel CSV file, keep getting '+'

Hello Richard Initially it appears that you left off a closing mark at the end of the file name. Also why don't you use read csv? Steve On Jun 21, 2014 12:01 PM, Richard Lerner richa...@uchicago.edu wrote: I saved what I consider a medium size Excel file--about 2000x 40 as a CSV. I am NOT

Re: [R] stop subscribing mailing list

Then unsubscribe. On May 21, 2014 10:00 AM, han...@purdue.edu han...@purdue.edu wrote: Dear, I would like to stop to receive any email from R-help mailing list for this email address. Thank you. Mingxuan Han __ R-help@r-project.org mailing

Re: [R] Console Output Formatting

Depending on the OS you are working with awk or gawk are great utilities for stripping columns from files. Also if you use a spreadsheet it is quite easy to drop a column. On Sep 4, 2013 5:59 PM, Noah Silverman noahsilver...@ucla.edu wrote: Hi, Working with R, I often want to copy and paste

Re: [R] how to install R 3.0.1

You can't. You must copy them to the new installation directory. After that you can use the update package command to check for and install the upgrades packages. On May 31, 2013 9:43 AM, Upananda Pani upananda.p...@gmail.com wrote: Hi John, Thanks for your reply .How to Update all the

Re: [R] how to install R 3.0.1

Thanks for the clarification. On May 31, 2013 10:19 AM, Prof Brian Ripley rip...@stats.ox.ac.uk wrote: On 31/05/2013 14:44, Steve Friedman wrote: You can't. You must copy them to the new installation directory. After that you can use the update package command to check for and install

Re: [R] Reading CSV file

Make sure you have the correct path to the file. On Apr 19, 2013 10:53 AM, Gafar Matanmi Oyeyemi gmoyey...@gmail.com wrote: I am trying to read a csv file using the code; contol - read.csv(RBS.csv) This is the error message I got; Error in file(file, r) : unable to open connection In

Re: [R] read.delim

You have to tell R what the column delimiter is. See Read.table. On Apr 2, 2013 8:28 AM, Shane Carey careys...@gmail.com wrote: Hi, Im reading in a .txt file into R that consists of 5 columns, however, when imported into R, it reads all the data into just one column. Is there a way of

Re: [R] How to count the nos. in a range?

Have considered cut and table ? On Dec 20, 2012 12:08 PM, Katherine Gobin katherine_go...@yahoo.com wrote: Dear R forum I have a following vector of random no.s x = runif(100, 0.01, 0.99) [1] 0.47212037 0.77867992 0.33947474 0.93369035 [5] 0.03720073 0.79307831 0.81801835 0.92710688

Re: [R] R-package FunctSNP

Did you download the zip file to your computer? Next install from zip file. On Aug 21, 2012 9:06 AM, ltro...@mappi.helsinki.fi wrote: Hy everyone, I am new in R so I will pose a simple question that I cannot find out reading tutorials. I would like to install the R-package FunctSNP by

[R] power in generalized linear models with categorical independent variables

of calculation? Thanks! Rich Richard A. Friedman, PhD Associate Research Scientist, Biomedical Informatics Shared Resource Herbert Irving Comprehensive Cancer Center (HICCC) Lecturer, Department of Biomedical Informatics (DBMI

Re: [R] Plotting skewed normal distribution with a bar plot

, perhaps in a different package? I'm working with R 2.13.2 on a windows based machine. Steve Friedman Ph. D. Ecologist / Spatial Statistical Analyst Everglades and Dry Tortugas National Park 950 N Krome Ave (3rd Floor) Homestead, Florida 33034 steve_fried...@nps.gov Office

[R] How to count numbers of a vector and use them as index values?from Sabrina

in the original vector x. length(result) [1] 8 result [1] 0 2 2 1 0 1 0 0 Thank you in advance, Paul -- Sarah Goslee http://www.functionaldiversity.org Sabrina Friedman Billige Flüge Marketing GmbH Emanuelstr. 3, 10317 Berlin Deutschland Telefon: +49 (33) 5310967 Email: utebachme

[R] cld object did not plot

. However, I can repost to the mixed effects list if anyone thinks that might be more appropriate. Thanks and best wishes, Rich Richard A. Friedman, PhD Associate Research Scientist, Biomedical Informatics Shared Resource Herbert Irving

Re: [R] Analog of least significant difference error bars for proportions

Friedman fried...@cancercenter.columbia.edu Cc: r-help@r-project.org Subject: Re: [R] Analog of least significant difference error bars for proportions Message-ID: 4ddaf5c4.3080...@xtra.co.nz Content-Type: text/plain On 24/05/11 11:23, Richard Friedman wrote: Dear R-list, In the R-book

[R] Analog of least significant difference error bars for proportions

would like to make them as meaningful as possible. Thanks and best wishes, Rich Richard A. Friedman, PhD Associate Research Scientist, Biomedical Informatics Shared Resource Herbert Irving Comprehensive Cancer Center (HICCC) Lecturer

[R] Accounting for overdispersion in a mixed-effect model with a proportion response variable and categorical explanatory variables.

Richard A. Friedman, PhD Associate Research Scientist, Biomedical Informatics Shared Resource Herbert Irving Comprehensive Cancer Center (HICCC) Lecturer, Department of Biomedical Informatics (DBMI) Educational Coordinator, Center for Computational Biology

[R] moving mean and moving variance functions

Hello Lets say as an example I have a dataframe with the following attributes: rownum(1:405), colnum(1:287), year(2000:2009), daily(rownum x colnum x year) and foragePotential (0:1, by 0.01). The data is actually stored in a netcdf file and I'm trying to provide a conceptual version of the

[R] installing ncdf on Ubuntu 10.04

Hello I'm trying to install the ncdf package on a Ubuntu 10.04 laptop. Can you offer suggestions to install this package? install.packages(ncdf, repositories = TRUE) Installing package(s) into ‘/home/steve/R/i486-pc-linux-gnu-library/2.12’ (as ‘lib’ is unspecified) --- Please select a CRAN

[R] NetCDF - rolling means and StdDev

Hello, I am trying to come up with a routine to calculate a rolling mean and standard deviation for three parameters stored in a NetCDF file. The NetCDF file contains 10 years of daily records for each of the three parameters, and I need the statistics for each of the three parameters. Below I

[R] Fwd: Questions about templates for R

. For example, PSPad editor provides new users predefined templates before writing their own scripts. Please let me know if it makes more sense. Yours AF Alon Friedman, PhD New York, NY 10014 Phone: 212-645-1538 -- Yours AF Alon Friedman, PhD New York, NY 10014 Phone: 212-645-1538

[R] help with npcdens function package np

Hello, I'm trying to calculate non-parametric probabilities using the np package and having some difficulties. OS is Windows, R version 2.11.1 Here is what I've done so far. library(np) veg - data.frame(factor(Physiogomy), meanAnnualDepthAve, TP) attach(veg) : for clarification dim(veg)

[R] nonparametric density and probability methods

Hello, I tried to post this earlier, but it seems that it did not appear on the list. If you've rec'd 2 m I'm trying to calculate non-parametric probabilities using the np package and having some difficulties. OS is Windows, R version 2.11.1 Here is what I've done so far. library(np) veg -

Re: [R] Any tools for working with US 2000 census data? (Zembower, Kevin)

Hi Kevin, Not an R-specific solution, but by far the easiest way to extract data from the 2000 census is to use American FactFinder. Go to the main page: http://factfinder.census.gov/home/saff/main.html?_lang=en Hover over Data Sets, click Decennial Census. Select the file you want (SF-2 for

Re: [R] alternatives to latex() or xtable()

An alternative solution that allows you to break it down by categories is in the functions below. Comments/suggestions welcome and encouraged. Note that much thanks is due to those who responded to an earlier post of mine on a similar topic. To use (assuming you have a data.frame falled

Re: [R] xtable.by

Thanks to all who helped out with this question. I have a version that's working reasonably well for me right now, and will post code if I manage a more generalizable version. Best, Ari __ R-help@r-project.org mailing list

[R] xtable.by

Friedman [EMAIL PROTECTED] [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented

Re: [R] Input appreciated: R teaching idea + a way to improve R-wiki

Just want to chime in and say that I think it's a great idea. It is, after all, a wiki, and even the bad entries will serve to be something like stubs that can be expanded upon by others and they play with them. When using e.g. the Gentoo wiki, I have run across some well-organized entries

[R] GWR modeling with dummy variables

Hi everyone, I'm working with a modest sized spatial database consisting of 1513 records and 50 variables. Fourteen of these are dummy variables delineating regional planning councils. I'm trying to understand how to integrate the dummy variables in the geographically weight regression model.